Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03858 ATGGCTTCTTCATTCTCAACTCATTTGCTTCAATCTCACAACCAACTTTCTCATCTTCAGGGTAATTTTAGCCAAGATGCGTTGTCTATGTTTCAAAGGTCACAAATTGGTTACAATAAATCATTGTCATTTGTTGCTTTGAGGTTTTCAGCCACGCAACAATCTTCTGTAGCAAGATCAATTAGATATAAGAGAATCACATGTGCAGCTGCTGCTTCTGAAAATGTTCAAGAGCTGCAAGCCAAAGTCACTACCAAATGTTTCTTTGACGTAGAAGCTGGGGGTGAATCTTTGGGCAGAATTGTTTTAGGCTTGTTTGGAGAGGTTGCTCCTAAAACAGTTGAAAATTTCCGTGCTTTGTGCACAGGAGAGAAAGGATACGGTTACAAAGGATGCTCCTTCCATCGTATAATCAAAGAATTCATGATTCAGGGAGGGGACTTCACTGAGGGAAATGGAACCGGTGGAGCTAGTATCTATGGTTCTAGTTTTGAAGATGAGAGTTTTGCCTTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCCGGTCCTAATACCAATGGTAGTCAATTTTTTATTTGCACTGTTAAGACTCCGTGGTTAGACAATCGACATGTCGTGTTTGGACATGTTATTGATGGAATGGATGTTGTGAGGACACTTGAATCTCAGGAAACAAGCAGGTTAGATATCCCTAAAAAGCCTTGCAGAATCGTTAATTGCGGAGAACTGCTCATAGATGGTTGA 753 0.409 MASSFSTHLLQSHNQLSHLQGNFSQDALSMFQRSQIGYNKSLSFVALRFSATQQSSVARSIRYKRITCAAAASENVQELQAKVTTKCFFDVEAGGESLGRIVLGLFGEVAPKTVENFRALCTGEKGYGYKGCSFHRIIKEFMIQGGDFTEGNGTGGASIYGSSFEDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRTLESQETSRLDIPKKPCRIVNCGELLIDG 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03858 250 FunFam Peptidyl-prolyl cis-trans isomerase 73 250 - -
Mepo3g03858 250 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 129 146 IPR020892 GO:0003755|GO:0006457
Mepo3g03858 250 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 86 246 - -
Mepo3g03858 250 CDD cyclophilin_ABH_like 86 244 - -
Mepo3g03858 250 SUPERFAMILY Cyclophilin-like 82 246 IPR029000 -
Mepo3g03858 250 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 192 204 IPR002130 GO:0000413|GO:0003755
Mepo3g03858 250 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 120 IPR002130 GO:0000413|GO:0003755
Mepo3g03858 250 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 146 IPR002130 GO:0000413|GO:0003755
Mepo3g03858 250 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 177 192 IPR002130 GO:0000413|GO:0003755
Mepo3g03858 250 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 205 220 IPR002130 GO:0000413|GO:0003755
Mepo3g03858 250 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 88 245 IPR002130 GO:0000413|GO:0003755
Mepo3g03858 250 Gene3D - 70 249 IPR029000 -
Mepo3g03858 250 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 89 244 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03858 Mepo-Chr3 48061044 48063719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03858 99 241 U-box Gene Family AT5G67530 45.139 2.20e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03858 K03768 - gmx:100785805 380.178