Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03857 ATGATCCCACTCACTCTTATTCATGGAGCTGATTCTAAAGGAGCAGTATGTTTGGATGGAACTTTACCTGGTTACCACTTCCATCCCGGATCTGGATCTGCTACAAATAGTTGGCTCATTCAATTGGAGGGAGGAGGATGGTGTAATACCATCAGAAGTTGTGTCTTTAGAAAAACTACTCGACGCGGTTCCTCAAAATACATGGAAAAGCAACTACCTTTCACTGGAATATTGAGCAATAAAGCTCAAGAAAATCCTGATTTCTTTAACTGGAACAGAGTCAAAGTGAGGTACTGTGATGGGGCGTCTTTCAGCGGAGACAGTCAAAACGAGGCTGCACAGCTTCAATTTAGAGGACAGAAAATATGGCTAGCTGCAATGGAAGAATTAATGTCCAAGGGAATGAAGAACGCCAACCAGGCTCTTTTATCTGGATGCTCTGCGGGTGGTCTGGCATCTATACTACATTGCGATGAGTTCCAAAGCTTGTTTCCAAAATCTACCAAAGTGAAATGTTTGAGTGATGCTGGATTTTTTCTTGATGCAACTGATGTATCTGGGGGGCACACATTGAGGAATCTGTTTGGAGGTGTAGTTAACTTACAGGAAGTGCAAAAAATTCTACCAAAAAGCTGTCTCAACCACCTGGACCCAACTTCGTGCTTCTTTCCTCAAAATTTGATCGATCATGTTCAGACTCCACTGTTTCTGCTGAATGCAGCTTATGATGCATGGCAGTTCCAAGAAAGTCTAGCCCCGCATTCAGCAGATCCTCATGGATCTTGGAATAATTGTAAATCAAATCATGCAAATTGTAATTCATCCCAAATTCAGATCCTCCAAAACTTCAGAAATCAAATGCTAAATGACATGAAAGGATTTTCAACGACTTCTCAATCCGGATTATTCATAAATTCTTGTTTTGCTCATTGCCAATCGGAGAGACAAGATACATGGTTTGCTGATGACTCTCCCCTCCTTAACAACATGCCAATTGCGACTGCCGTTGGAAATTGGTTTTTTGATCGTCAAGTTGTCAAAGCTATTGATTGTGCTTACCCCTGTGACAATACCTGCCATAATCTGGTCTTCAATGTTGGTAAATCTGCCATGGTAGACTCTCAATCCACAAGTGATGATATTCCTACCTCCATGCTATATTCCCGCTCCACAAGGTTGACTTTTAGTGCTGGCTTATTTGTACTAAGTGCTTTATTGCCAATTACATGCTCGTAA 1236 0.415 MIPLTLIHGADSKGAVCLDGTLPGYHFHPGSGSATNSWLIQLEGGGWCNTIRSCVFRKTTRRGSSKYMEKQLPFTGILSNKAQENPDFFNWNRVKVRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELMSKGMKNANQALLSGCSAGGLASILHCDEFQSLFPKSTKVKCLSDAGFFLDATDVSGGHTLRNLFGGVVNLQEVQKILPKSCLNHLDPTSCFFPQNLIDHVQTPLFLLNAAYDAWQFQESLAPHSADPHGSWNNCKSNHANCNSSQIQILQNFRNQMLNDMKGFSTTSQSGLFINSCFAHCQSERQDTWFADDSPLLNNMPIATAVGNWFFDRQVVKAIDCAYPCDNTCHNLVFNVGKSAMVDSQSTSDDIPTSMLYSRSTRLTFSAGLFVLSALLPITCS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03857 411 PANTHER NOTUM-RELATED 3 361 IPR004963 GO:0016787
Mepo3g03857 411 Pfam Pectinacetylesterase 2 345 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03857 Mepo-Chr3 48049668 48054972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03857 1 377 Carbohydrate Esterase AT3G62060 71.958 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03857 K19882 - gmx:100785270 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03857 3 48049668 48054972 Mepo4g03547 4 44885834 44889935 PCT