Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03855 ATGGGAAGACACTCTTGTTGCTATAAGCAGAAGCTTAGGAAAGGTCTATGGTCACCTGAGGAGGATGAAAAACTTTTGAATCATATTACTAAATATGGTCATGGATGTTGGAGTTCAGTTCCTAAGCAAGCAGGTCTTCAAAGGTGTGGTAAGAGCTGCAGGCTTAGGTGGATTAATTACTTGAGGCCTGATTTAAAAAGAGGTACATTTTCACAAGAAGAAGAAAATCTCATCATTGAACTTCATTCAGTACTAGGGAATAGATGGTCACAAATTGCTGCACAATTGCCAGGGAGGACTGATAATGAAATAAAGAATCTTTGGAATTCTTGCTTAAAGAAGAAACTGAGACAAAAGGGTATAGACCCTGTCACTCATAAACCACTTTCTGAGGTAGAAAATGTTGATGAGGAAGAGGAAAAAACTAGAAGCCAAGAGAAAGCAGCAGAAATATCAGAATCAGATGAATTGAACCTTGTGAGATCAGAAAGTACTTCCAAATCAGATGCTGTTTCCTATGAGCCAAAACAACCTTCAATTGTCCTAAAAGGTTATGCAACTGAAATGGAAGTGGAAGGTTCTTGTTCCAACTATTTGATGGGAAATTACCCTATTCAGATGAATTACACATCCACTGATAATATTCCAAATAATCCAAACTCTTCTCATTGGTTCAACCAAACAGGATTAAAACCTTTTGACATGAACTCTGAATTTACTTCAACTTCTAACATCATGTCAATTCTCCCACCAACTAATACCTCATTTCTTCCTAATACTTTTTGCTACAAACCATCACTTGATGATGTTCCTTCAGAAGATGTTTCTATGTCTTCATCTTCTTTCCCTATGAAGAATAGTATCTTATCTTCTTGGGGAATTACAGATTGTGACACCTCTATTAAAGAGAATCAAACAGAAGAAGAAGCCAAGTGGAATGAGTATCTTCACAATCCAATGTTAATGCTACAAAATCAAGCATCTGAATCTTTATGCAATGAAATAAAGCCTGCCACAAATTTAGGCCCTGATGGTTTAGGGGACATATTGCCACATTCCAAGCAACAAGAATCTTCTCAATCTTATAATATAGCAGCTTTTGGACAAGTGTAG 1113 0.3675 MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSEVENVDEEEEKTRSQEKAAEISESDELNLVRSESTSKSDAVSYEPKQPSIVLKGYATEMEVEGSCSNYLMGNYPIQMNYTSTDNIPNNPNSSHWFNQTGLKPFDMNSEFTSTSNIMSILPPTNTSFLPNTFCYKPSLDDVPSEDVSMSSSSFPMKNSILSSWGITDCDTSIKENQTEEEAKWNEYLHNPMLMLQNQASESLCNEIKPATNLGPDGLGDILPHSKQQESSQSYNIAAFGQV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03855 370 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo3g03855 370 FunFam MYB transcription factor 68 140 - -
Mepo3g03855 370 MobiDBLite consensus disorder prediction 123 162 - -
Mepo3g03855 370 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo3g03855 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo3g03855 370 PANTHER MYB DOMAIN PROTEIN 55 1 295 - -
Mepo3g03855 370 FunFam Myb transcription factor 11 67 - -
Mepo3g03855 370 CDD SANT 17 61 IPR001005 -
Mepo3g03855 370 SMART sant 13 63 IPR001005 -
Mepo3g03855 370 SMART sant 66 114 IPR001005 -
Mepo3g03855 370 MobiDBLite consensus disorder prediction 123 173 - -
Mepo3g03855 370 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mepo3g03855 370 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo3g03855 370 Gene3D - 68 150 - -
Mepo3g03855 370 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mepo3g03855 370 CDD SANT 69 109 IPR001005 -
Mepo3g03855 370 Gene3D - 11 67 - -
Mepo3g03855 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03855 Mepo-Chr3 48017516 48019419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03855 1 155 MYB Transcription Factor Family AT4G01680 81.290 2.44e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g03855 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03855 K09422 - gmx:100782199 442.195