Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03848 ATGGAAAACCACCCCCACCATCTTGAAATGGATTTCCCCCACAACAACAGTATAGATCCTCCGATCATAGAAATGGATTTCTTCTCACCATCACCTAACAAAAACAACAAAGAAGATGATCTAGATAAACATGGCAGCATCATCAAAGAAGGATCACCAACACTACTCCTCACTCAGCATGATCCTGTTAACACTGGACTGAATTTAACGTGTTCAAGTGCTGCAGTTTCAAAAGAAAAAAATCTTGAAGATTCTGAAACTGAGATGAGTATACTTGAAAGTGAATTGAGGAGGGTGCAAGAAGAGAATCATAAACTGAGAATTATGTTAGAACAAATTACCAAAAGCTATAGCCAACTACAAGCTCAGTTGTTCATCACTTTGCAGAAACAAAAACCAGACCATGGTCAGAATATGGAAGAAAATCATGTGATGGTATCAGAACAAAAAATTATGAATAATGCATTGGTTTCGGATGGAAAGCAGGCTTGTCCTCCTGATCATCCTGCAGAAGATTCCTCACATTCTTCCAAGTTAGAAGAACCAGCACAAGATCTAATTCCTTTCAAAAAAGCCAGGGTTTCCATACGTGCAAGATCAGAAGCTCCCCTGATCAGCGATGGATGTCAATGGAGGAAATATGGACAAAAAATGGCCAAGGGTAACCCTTGTCCTCGTGCCTACTATCGTTGCACTATGGCTGTAGGATGCCCAGTTCGCAAACAGGTCCAAAGATGTGCAGAAGACAAGACAATACTAATAACAACATACGAAGGCAACCACAATCATCCACTCCCGCCAGCTGCAACTGCCATAGCAAACACAACATCAGCAGCTGCAGCAATGCTGCTATCAAGTTCAACCTCATCAACACTAAGAAAGGAATCAGCAGGATATTTATCTAATTCATTTCCCTATGCAACAATGTCAAGTACCCTATCAGCTTCTCAACCCTTCCCAACAATCACCCTCGACTTGACACAAAACCTTAACCTCTCCAGAGTTCCTCTACCATTGCAAATGCAACATCCGACACAACTACTAGGGATTAACCCATTGTTCTTCTCACACAAGCTACCACCATTACTTCAACTAGGGCAACCGCCACCTTCATCTATGGTTGAGAGTGTCAGTGCAGCCATTTCTTCGGATACAAATTTTACTACAGCTTTGGCCGCAGCGATTTCATCAATTATTGGAGCACAAAGAGGTGGTGATGGTAATAATAATCTTGCAGGTGTAGTTCCAGGTCCAGGTTCACCTCAGCTTCCTCAATCATGCACTACATTCTCTACCAATTAG 1302 0.4194 MENHPHHLEMDFPHNNSIDPPIIEMDFFSPSPNKNNKEDDLDKHGSIIKEGSPTLLLTQHDPVNTGLNLTCSSAAVSKEKNLEDSETEMSILESELRRVQEENHKLRIMLEQITKSYSQLQAQLFITLQKQKPDHGQNMEENHVMVSEQKIMNNALVSDGKQACPPDHPAEDSSHSSKLEEPAQDLIPFKKARVSIRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAATAIANTTSAAAAMLLSSSTSSTLRKESAGYLSNSFPYATMSSTLSASQPFPTITLDLTQNLNLSRVPLPLQMQHPTQLLGINPLFFSHKLPPLLQLGQPPPSSMVESVSAAISSDTNFTTALAAAISSIIGAQRGGDGNNNLAGVVPGPGSPQLPQSCTTFSTN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03848 433 MobiDBLite consensus disorder prediction 165 182 - -
Mepo3g03848 433 Pfam WRKY DNA -binding domain 207 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03848 433 FunFam probable WRKY transcription factor 31 190 267 - -
Mepo3g03848 433 MobiDBLite consensus disorder prediction 33 47 - -
Mepo3g03848 433 ProSiteProfiles WRKY domain profile. 200 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03848 433 MobiDBLite consensus disorder prediction 27 47 - -
Mepo3g03848 433 SUPERFAMILY WRKY DNA-binding domain 199 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g03848 433 Gene3D WRKY domain 190 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g03848 433 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 76 406 IPR044810 GO:0003700
Mepo3g03848 433 Coils Coil 75 123 - -
Mepo3g03848 433 SMART WRKY_cls 205 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03848 433 MobiDBLite consensus disorder prediction 158 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03848 Mepo-Chr3 47951196 47954595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03848 63 433 WRKY Transcription Factor Family AT4G01720 44.836 8.44e-87 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g03848 WRKY 2.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03848 - - psat:127132551 489.96