Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03834 ATGATGGAAGATGGTAGTACATTCTCGTCGGCGAAGATATCCGTTTGGTGGGACATAGAAAACTGTCAAGTCCCACGATACTTCAACGACGCTAATTCCATCGCTCAAAATATAACCACCGCTCTCTTCAACTCCAACTTCCATGGCCCACTTTCCATTTCTTCTTACGGTGACACCACTCGCATCCCCTCTCACGTTCAACACGCGCTTTCTTCCACCGGCATTTCCCTCCACCACGTCCCCGCCGGTGCGAAAGATGCTAGTGATAAGAAGATACTTGTTGATATGTTGCTATGGGCTATTGATAACCCTGCACCTGCTAATTATTTGTTAATTTCTGGTGATAGAGATTTTTCAAATGCCCTTCATCAACTTCGTATGAGAAGGTATAACATTCTTCTTGCTCAACCTTTTTGTGCTTCTAAACCTCTCACCGCTGCCGCCAAAATTGTTTGGCAATGGCCTACACTCATTGCTGGTGGTCCTCCTTTCTTCACTGAACCAAACCCTAATTTCTCTAGGAAACTTTTCTATCAACCTAATATTTCTGTTTCTAATTCTCAACAATCAAAGACTTCAAAGTTTTTTAGATTAGCCCCACATGAATTCTTTTCTAGTAATGACCCTACAATAATCCCAATTACCACTAATCTCCAAACTCACTATCACTCCTCAACTAAAAGCATTGCTGATTTTAATGATCATAATAAGCAATTAATGCTTCCAATTTCGAATGTTAATGATGATGCAACCAATGTTGGAAATGATAACAGCTCTAATTGTGGTAGGGGTCAAGAATTTTGTAATGTGAGGAAAGTGAAGAGTATGCCAACAATATCAACTTATGAGAATTTGCAAGGACTTGTGGATGTTATTCTACTCACTTTGAATACACTCATGACTGAAATGGTTTTTCCTACCGAAGGAAATATAATTGATTGCATTCGTTATGGGGATCCCAAATATGAAACAGTTGATATTAGGAAAGGTTTGCATTGTGCAATTGAGCAACAGAAGGTGGTTAAACAAGTCTTTGGCACATTACGTTTGTATGTCGTTGCAAATGAGAATCTATGGAAGTGTGTGAACCCTTTACGTGGTTTGCCCAGTCATTTCCCAGACGCAATCTGGGTTAGGATAGAGCAATTCCTTGCTTCATCTTCAGGAAGATCGGCGATTTTGGCGTCTTGTAACAGATATGAAGCTTCATTAATTCTAAAGAAATTGTGTCTTGAAGAGCTTGTGTTGGGTGATGTACTTAAGATTTTGGAGATTATAATCACAATCAAGAAATGGATTATACCTTATCATTCTAGATGGCAGCCGATTACCATTTCACTTACAGAGACTAAAGATGATAGTTGA 1365 0.3934 MMEDGSTFSSAKISVWWDIENCQVPRYFNDANSIAQNITTALFNSNFHGPLSISSYGDTTRIPSHVQHALSSTGISLHHVPAGAKDASDKKILVDMLLWAIDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPFCASKPLTAAAKIVWQWPTLIAGGPPFFTEPNPNFSRKLFYQPNISVSNSQQSKTSKFFRLAPHEFFSSNDPTIIPITTNLQTHYHSSTKSIADFNDHNKQLMLPISNVNDDATNVGNDNSSNCGRGQEFCNVRKVKSMPTISTYENLQGLVDVILLTLNTLMTEMVFPTEGNIIDCIRYGDPKYETVDIRKGLHCAIEQQKVVKQVFGTLRLYVVANENLWKCVNPLRGLPSHFPDAIWVRIEQFLASSSGRSAILASCNRYEASLILKKLCLEELVLGDVLKILEIIITIKKWIIPYHSRWQPITISLTETKDDS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03834 454 Pfam NYN domain 12 148 IPR021139 GO:0004540
Mepo3g03834 454 CDD PIN_limkain_b1_N_like 12 137 - -
Mepo3g03834 454 Gene3D - 9 155 - -
Mepo3g03834 454 PANTHER LIMKAIN B LKAP 9 328 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03834 Mepo-Chr3 47817474 47819273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03834 8 270 C2H2 Transcription Factor Family AT5G61190 49.811 5.53e-71 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03834 - K17573 mtr:11425911 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03834 3 47817474 47819273 Mepo3g03834 3 47817474 47819273 ECH