Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03831 ATGGGAATGGGCAATTTTGCCCTTAATGAGACATCCACTCATGAAAATGACATTTTTACCCTTGTCTTCATCTTCTTCTCATTCCATTTTCTTCCTACTGGATCTGCAAACAATAGAAACAAACACCATCCTTATTCTATAGCAATGGCAGCAGCTGGGCAACTGAACGTGATTGATTCACCTTCGCATGGTTCCCGTAGCGTCGATTGCTTTGAGAAGCTCGAACAAATCGGCGAAGGCACCTATGGTCAAGTTTACATGGCCAAAGAGATCGAAACCGGTGAAATTATCGCTCTCAAGAAAATATGTATGGATAATGAGAGAAGGAGTATGAATATGAATGTTTCGGATCTTGATCTTGAACGTGTTGTTGTTGCTCCACCGTAG 387 0.4186 MGMGNFALNETSTHENDIFTLVFIFFSFHFLPTGSANNRNKHHPYSIAMAAAGQLNVIDSPSHGSRSVDCFEKLEQIGEGTYGQVYMAKEIETGEIIALKKICMDNERRSMNMNVSDLDLERVVVAPP 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03831 128 ProSiteProfiles Protein kinase domain profile. 71 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03831 128 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Mepo3g03831 128 Gene3D Phosphorylase Kinase; domain 1 58 117 - -
Mepo3g03831 128 SUPERFAMILY Protein kinase-like (PK-like) 66 108 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03831 Mepo-Chr3 47801176 47801748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03831 47 108 Core Cell Cycle Gene Families AT5G10270 79.365 6.23e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo3g03831 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03831 K08819 K14794 rvl:131300827 108.227