LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g03825	ATGGATGATTGTTGCGCTGTTTGTGCCGAACCATTGGAATGGGTTGCGTACGGACCTTGTTTGCATCGTGAGGTTTGCTCCACCTGCGTTGCTCGTCTTCGTTTCATTTGTGATGATCGACGTTGCTGCATCTGTAAGACCGAATGTAATCTCATCTTTGTTACCAAGGCTCTTGGAGATTATACAAGAGTGATCAATGACTTTTCATCCCTGCCGTCTGAGGTGAGGGAAGGGAAGGTTGGACCGTACTGGTACCATGAGGATATGAATGCATTTTTCGATGACGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTTTCTTGCAGTGAATGCGACAAGATGGAGGAGCAACAAAATGATGGTTCAAGGCGACAAAGGTTTAGGAATATAGGGCAGCTGAAGGGTCACCTATTCCACCGTCATAAGTTGCATATGTGCAGTTTGTGTTTGGAGGGAAGGAAGGTGTTTATATGTGAGCAAAAATTATATACTAGAGCCCAGTTGAATCAACACATAAGCACAGGTGATTCCGATGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTTTGCAGAACCCCATTTTATGGGGACAATGAACTGTACACACACATGTCTACGGAACATTATACTTGTCATATATGCCAAAGGCAGCACCCGGGACAATTTGAATACTATAAGAACTATGATGACCTTGAGATCCACTTCCGACAACAACATTTCTTATGTGAAGATGAGGCTTGCCTTGCCAAGAAATTTATTGTTTTTCAATCTGAATCAGAGATGAAGAGACATAATGCTACGGAACATGGAGGGCGTATGTCACGGTCAAAGCGTAATGCTGCTCTTCAGATACCGACTAGTTTTCGATATAGACACAATAATGAACAGGATCAGCGCCGTGGAAGAGGCCGGACATTTCGTCGTGATCATTCTGAAAATCAACTTTCCATGGCCATTGAAGCCAGTTTGGAGACTGCTAATGCTGAGCAGACATATCGTGAGCCAACTTCAAGCAATGGGCCAATTGCTTATGATGACGGAGATGCACATATTGATTCCATCGTTAATCCGTTTGAATCATTAGCTACTGCAGATTCTGAATCAACTTCAAGATACCGTCAGGCCTTAGGGCATAGCTCTAAACCTCTGGTAGACTCTTCCTTTCCTCCACTTCCTGGCCAGGAAAAGTCCAAACACGAGTCTGAAGGTTCATCTAGCAATACTATGGCCGCACGTTTACGTCGGCATGGCAACAGAAATGTATCTGTTATTAATTCTGGAAATGCCTGGTCTGTACCAAGTCGTGGACCTGTACAACCTTCGCAATCTAAAAAGACAACAAATCGTGCTCTTGGAGGGTCTCAAAATTCTGGCCAGATGAAGACAGTAATTAACAGTGGACTTCCAGCATCAAGTTTTGCTAATTCTATTCAAGCCGCACATAGAACTGCTCATGGAAAACTACCTGCTGGTCCATCGAGGGACACACGTGACAATGGAAAAATCGTTCACTCTGCATCAGCTCCAAACCTTGTTGAGAACAACCCTGTTGGAGTTTCAATTTCTGATTTTCCTCCAGTTTCTGCTGCGCAAGTGAGCAAGTTACCTACAAGTAGCCAGCCTCCGCTGAATGTGGAGAATGTTCAGTCTGCCAACAAGTCCTTGGTTGAAAAGATTCGTAGTGCGCTTGATTTTGACGAAGATAGATACACTATATTTAAAGACATATCTGCTCAATATCGCCAAGGCACGATAGATACTGATGGATATGTGGACTGTGTGCAGCAGTTTGGCTTGTTTCATCTTGTACCTGAGCTGGCAAGACTATGCCCGGATGCTCGGAAGCAGAGAGAACTTGTGGAGTCTTACAATGCTGGTTTGCAAAGAAACGCTTTCCAAGAAAATGACGGGGTTTATGGCAGCGCTAGCACCCATCGCAAGGACAAAAATGTCGACAAGAAAGGTAAAGGTAAGTCATTAGATGTTAGGCGGAGTAACTCCACTGAGAAATTAGCAGATAGCTTTTTAAGCACTGTTCATCAACTACAGTCAAGTTATAAACCTTCAGAAGAGAAGTTGGAGGTGCTATCAAAGGGTGCTTATCGCACCGACAAAGGTAAATTAAAAATTGAGCCGCAGATTCAAACAAACTTTAGCAGTCAACATAAGACTAAGCTTGGTGGGCAGACTGAAACTTCAAATGGCAGTTTATCTAATCAAAATAAGGAGGATGGGGGTGGTGGGAACAAGCAGCGCAAGAAAGCTTCCAAGTTCCTCAGAGTGCGCCTTGGTGATGGTTCTGCTTCGGCCCTTCTAGATCTTGAAAACTCACGGACCACTTCTGATCCTGGAACAGACAGTTTAAATGGTAGCAATAATGATTCTGGAGTTGGGCTACCTGTACGAGGTGTTTGGCGAAAGGGGGGAGGTCAAAAACTCTTCCCCTGA	2478	0.4431	MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTECNLIFVTKALGDYTRVINDFSSLPSEVREGKVGPYWYHEDMNAFFDDVDHYKMIKAMCRLSCSECDKMEEQQNDGSRRQRFRNIGQLKGHLFHRHKLHMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSDVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQFEYYKNYDDLEIHFRQQHFLCEDEACLAKKFIVFQSESEMKRHNATEHGGRMSRSKRNAALQIPTSFRYRHNNEQDQRRGRGRTFRRDHSENQLSMAIEASLETANAEQTYREPTSSNGPIAYDDGDAHIDSIVNPFESLATADSESTSRYRQALGHSSKPLVDSSFPPLPGQEKSKHESEGSSSNTMAARLRRHGNRNVSVINSGNAWSVPSRGPVQPSQSKKTTNRALGGSQNSGQMKTVINSGLPASSFANSIQAAHRTAHGKLPAGPSRDTRDNGKIVHSASAPNLVENNPVGVSISDFPPVSAAQVSKLPTSSQPPLNVENVQSANKSLVEKIRSALDFDEDRYTIFKDISAQYRQGTIDTDGYVDCVQQFGLFHLVPELARLCPDARKQRELVESYNAGLQRNAFQENDGVYGSASTHRKDKNVDKKGKGKSLDVRRSNSTEKLADSFLSTVHQLQSSYKPSEEKLEVLSKGAYRTDKGKLKIEPQIQTNFSSQHKTKLGGQTETSNGSLSNQNKEDGGGGNKQRKKASKFLRVRLGDGSASALLDLENSRTTSDPGTDSLNGSNNDSGVGLPVRGVWRKGGGQKLFP	825

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g03825	825	SMART	c2h2final6	219	249	IPR013087	-
	Mepo3g03825	825	SMART	c2h2final6	250	279	IPR013087	-
	Mepo3g03825	825	SMART	c2h2final6	195	218	IPR013087	-
	Mepo3g03825	825	SMART	c2h2final6	108	143	IPR013087	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	782	806	-	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	276	323	-	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	717	763	-	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	780	825	-	-
	Mepo3g03825	825	ProSiteProfiles	Zinc finger RING-type profile.	5	46	IPR001841	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	720	755	-	-
	Mepo3g03825	825	CDD	RING-HC_ZNF598	3	53	IPR041888	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	651	675	-	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	433	469	-	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	337	358	-	-
	Mepo3g03825	825	PANTHER	ZINC FINGER PROTEIN 598	1	726	IPR044288	GO:0061630\|GO:0072344
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	375	419	-	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	646	675	-	-
	Mepo3g03825	825	MobiDBLite	consensus disorder prediction	302	323	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g03825	1	820	C2H2 Transcription Factor Family	AT3G62240	53.052	0.0	836

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g03825	K22381		-	gmx:100780426	1303.89

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g03825	3	47727459	47732865	Mepo3g03825	3	47727459	47732865	ECH