Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03806 ATGGACGCGAAGGATATTCTTGGTTTGCACAAAAACTCATTTCCATCTTCTCTTGATAATAAAAAATCTCGACCTCCCAAAGAATCTCAGAGAAAACCTGATGGCATTTCACGCGAGGTCTATGCACTTACTGGTGGAATGCCACCTCTTATGCCATCAATTGATGCTTCTCAATTGAAGAAAAAGCCTCCTACTCATGAAAAGGTTACTTGGCAATGGCTTCCTTTCACCAATTCTGCTCGTAAAGATGATCTTCATCTTTACCATTGGGTTCGAGTAGTCAATGGTGTTCTACCTACTGGAGACTATTCTTTTGCCAAGTACAACAAGTCTGTTGACATTGTCAAATACACAGATGAGGAATACGAAAAGTATTTGACAGATCCTATGTGGACCAAGGAGGAGACAAATGAATTATTTGATTTGTGTGAGAGGTTCGATCTTCGTTTTGTTGTGATAGCTGATAGGTTCCCATCATCTCGGACTGTAGAGGAGTTAAAGGATCGATATTATAGTGTGTTGCGGGCTATATTACTTGCCAGGGCTGCATCTTCGGGGGACATTGCAACACATCCTATCATTAAGGAACCATATAATGTTTCACAAGAAATGGAGCGAAAACGGGCACTGTCCATGGTCCTCTCCCAAACAAGACAACAAGAGAAAAGAGATGAAGAGGTTCTTATTGAAGCAAAAAGGATAGCTGAATTACGGATGGCTTCTAAGGTTACTGAACAGTCTCAATTGGCTGTTGCTACAAATGCTGATACAGAACTTACAGAGAGGGCTGTCCCTGGTGAAACTGTATCTCCTTCAAATGTGCAACTTCCACAAATGGTCATGCCTTCTGCAGATAATGCTTCTACTCTAGCTTCTCTTCGCATGCTTCGTGTATATTTGAGGACATATGCACTCGAGCAAATGGTGCAAGCTTCAAACTCAACTGCTGGAGTTCGGACTATAAAACGGGTTGAGCAAACATTGCAAGATCTCGGGGTTAATTTGAAACCGAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAACTAAGAAGGGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCCGAAGGTTCATCTTTCCGTGATGGATCCTACGGTGAAACACCAGGCACACCAAAGGATCGTACATTTATTCCCGATTCGTTGAATTTTGGAGGCGAAAGGGTTGGCAAAAAGGACCAAAAACGCAAGGGGCATGGAGCTCCACCTACAGCAGCTCATAAAAGACCTAGAAAACAAAAGGCCTCAGATCTTTAA 1302 0.4247 MDAKDILGLHKNSFPSSLDNKKSRPPKESQRKPDGISREVYALTGGMPPLMPSIDASQLKKKPPTHEKVTWQWLPFTNSARKDDLHLYHWVRVVNGVLPTGDYSFAKYNKSVDIVKYTDEEYEKYLTDPMWTKEETNELFDLCERFDLRFVVIADRFPSSRTVEELKDRYYSVLRAILLARAASSGDIATHPIIKEPYNVSQEMERKRALSMVLSQTRQQEKRDEEVLIEAKRIAELRMASKVTEQSQLAVATNADTELTERAVPGETVSPSNVQLPQMVMPSADNASTLASLRMLRVYLRTYALEQMVQASNSTAGVRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKDRTFIPDSLNFGGERVGKKDQKRKGHGAPPTAAHKRPRKQKASDL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03806 433 SMART sant 127 176 IPR001005 -
Mepo3g03806 433 MobiDBLite consensus disorder prediction 1 36 - -
Mepo3g03806 433 MobiDBLite consensus disorder prediction 21 35 - -
Mepo3g03806 433 MobiDBLite consensus disorder prediction 401 415 - -
Mepo3g03806 433 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 423 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Mepo3g03806 433 Pfam SANT/Myb-like domain of DAMP1 103 177 IPR032563 -
Mepo3g03806 433 CDD SANT_DMAP1_like 131 173 - -
Mepo3g03806 433 SUPERFAMILY Homeodomain-like 127 178 IPR009057 -
Mepo3g03806 433 Gene3D - 100 187 - -
Mepo3g03806 433 FunFam DNA methyltransferase 1-associated protein 1 99 186 - -
Mepo3g03806 433 MobiDBLite consensus disorder prediction 370 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03806 Mepo-Chr3 47542801 47549865 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g03806 SANT_DAMP1_like 4.4e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03806 K11324 - gmx:100818926 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03806 3 47542801 47549865 Mepo3g03806 3 47542801 47549865 ECH