Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03800 ATGATGATGGAGAAAAAGGGTTTGAATATGGAGGATTATGCGAATATTGGATCTTTCCCTAGCAACTCATTTCCAAGTGTGTTTGATTTATCTGAAGAAAGGAGCTTCATGGAGTTATTGGGTGTGCAGCAGAACATGAACAGTTATAGTAATAGTTTGTTTGATTTGCCTGTGGTTGTAAAGGAACAACCTTTGGAGAGTGATGGGAATGGAAAAGAGTGTTCAGAGGTTTTGAATAGTCAACAACAACCTGCTACTCCTAACTCTTCATCTATTTCATCTGCTTCTAGTGAAGCAATCAATGATGAACACAATAAAACTGTTGACCAAACTAATCATCAACTCAACAAACAGTTGAAGGCTAAGAAGACAAATCAGAAGAGACCAAGAGAAGCCAGAATCGCTTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAATACGGCCAAAAAGCTGTTAAAAATAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACACGTGGAGAGGTCTTTGAGTGATCCAACCATTGTAATAACAACCTACGAAGGAAAACACACACATCCAAACCCAATTATGTCTCGTTCTTCAGCTGTTCGTGCTGGATCTCTATTACCACCACCAGCTGAATGCACCACCAACTTTGGTTCTGATCAAAACTACAATATATCCCAATATTATAATCAGCAGCATCAACAAGTAATCTTCAATACATTGTCGTCTCTGGGTTTCCCTTCAAAGAATATGAATGCTACTTTTTCTCAAGTGAGACCACTTTGTAATCCAAGGGTACAGGACAATGGCCTTCTTCAAGATGTTGTTCCTTCACATATGTTCAAGGAGGAGTAG 891 0.3962 MMMEKKGLNMEDYANIGSFPSNSFPSVFDLSEERSFMELLGVQQNMNSYSNSLFDLPVVVKEQPLESDGNGKECSEVLNSQQQPATPNSSSISSASSEAINDEHNKTVDQTNHQLNKQLKAKKTNQKRPREARIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKHVERSLSDPTIVITTYEGKHTHPNPIMSRSSAVRAGSLLPPPAECTTNFGSDQNYNISQYYNQQHQQVIFNTLSSLGFPSKNMNATFSQVRPLCNPRVQDNGLLQDVVPSHMFKEE 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03800 296 SMART WRKY_cls 145 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03800 296 MobiDBLite consensus disorder prediction 65 129 - -
Mepo3g03800 296 Pfam WRKY DNA -binding domain 146 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03800 296 SUPERFAMILY WRKY DNA-binding domain 137 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g03800 296 ProSiteProfiles WRKY domain profile. 140 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03800 296 Gene3D WRKY domain 129 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g03800 296 MobiDBLite consensus disorder prediction 73 101 - -
Mepo3g03800 296 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 72 239 IPR044810 GO:0003700
Mepo3g03800 296 FunFam WRKY transcription factor 57 131 205 - -
Mepo3g03800 296 PIRSF WRKY_txn_fact_IIc 2 296 IPR017396 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03800 Mepo-Chr3 47504112 47505815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03800 84 296 WRKY Transcription Factor Family AT2G47260 52.697 9.85e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g03800 WRKY 2.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03800 - - gmx:100784158 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03800 3 47504112 47505815 Mepo3g03800 3 47504112 47505815 ECH
Mepo3g03800 3 47504112 47505815 Mepo4g03602 4 45423361 45425335 PCT