Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03789 ATGGATGAAACAAAATCCAAGCACTTGTCTGACTCAATAGAAGGACAAGCTGAGGAGGAGTCTATTCATTCGGATTGGGAAACTTTTGGAAAAAGAATTATACTGAAGGGAATAGAAATGTTTGGGAGAAATAGTTGTCTTATAGCTAAGAACATACTTTTTATGATGAAGACTTGTTCGGAAGTTGCTAGATACATGTATGCTGAAGTGTCAATGCCACATGGATCCATGGACGAAAATGGGCAATCAAATGCAATGTGCATTGACAATGAGATGCCATCAAAGTCAAGGTCGATGGCAAGAAAGAACAAATCTAAGAAGTTCAAATATTCTTCAAAATCTTGTGGACTTCCATCTAAATGGAAAAGAAGAAGAAATACTGATGAGAAAAACAAACTGGAAAAGCACTATACACCTTGTGAATGTGAGGGAGCGTGTGGAAAGCAATGTCCATGTCTTCTTAATAGTTCTTGCTGTGAAAAATACTGTGGGTGTTCAAAGCTCTGTAAAAATCGATTTGGAGGATGTCAGTGTACTAAGAGTCAGTGTAGAAGTCGACACTGTCCATGTTTTGCAGCTTCAAGAGATTGTGACCCTGATGTATGTCGAAATTGTTGGGTTAGTTGTGGAGATGGTAACTTGGGAGAGTCGTCTCATCGTGGAGAGGATCAATGTGAAAACATGATGCTTCTTTTAAGGAAACAACAAAAGATTCTATGGGCAAGGTCTGATGTTGCTGGATGGGGAGCTTTCTTAAAGGCCCCAGCAAACAAAAATGATTTTTTAGGAGAGTACACTGGTGAAGTAATCTCTCATATAGAAGCTGATAAGCGTGGAAAATTTTATGATCGTGTAGACTTTTCGTACCTTTTTAACTTGAATGATACGTATTGTCTTGATGCTTTTCGCAAAGGGAACAAGTTGAAGTTTGCAAATCACTCATCAAAAGCGAATTGCTATGGAAAGATTGTGTTTGTTAATGGGGATCATCGAGTAGGAATATTTGCAAAGGAACGCATTGAAGCTGGGGAGGAGCTTTTCTTTGATTACGGGTATGATGAAGACAGTCGACCACCATGGCTTCATAAACTTCTAGATGATGGTTCCAAGGAAGATGATGATCCAACATTTTATCAAGGAAAAGCCAAGAAACATTGCTCTCGCTGA 1167 0.389 MDETKSKHLSDSIEGQAEEESIHSDWETFGKRIILKGIEMFGRNSCLIAKNILFMMKTCSEVARYMYAEVSMPHGSMDENGQSNAMCIDNEMPSKSRSMARKNKSKKFKYSSKSCGLPSKWKRRRNTDEKNKLEKHYTPCECEGACGKQCPCLLNSSCCEKYCGCSKLCKNRFGGCQCTKSQCRSRHCPCFAASRDCDPDVCRNCWVSCGDGNLGESSHRGEDQCENMMLLLRKQQKILWARSDVAGWGAFLKAPANKNDFLGEYTGEVISHIEADKRGKFYDRVDFSYLFNLNDTYCLDAFRKGNKLKFANHSSKANCYGKIVFVNGDHRVGIFAKERIEAGEELFFDYGYDEDSRPPWLHKLLDDGSKEDDDPTFYQGKAKKHCSR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03789 388 MobiDBLite consensus disorder prediction 364 381 - -
Mepo3g03789 388 SMART set_7 236 357 IPR001214 GO:0005515
Mepo3g03789 388 SUPERFAMILY SET domain 106 356 IPR046341 -
Mepo3g03789 388 MobiDBLite consensus disorder prediction 364 388 - -
Mepo3g03789 388 Gene3D SET domain 137 353 IPR046341 -
Mepo3g03789 388 Pfam CXC domain 175 206 IPR041355 -
Mepo3g03789 388 MobiDBLite consensus disorder prediction 94 115 - -
Mepo3g03789 388 Pfam SET domain 247 351 IPR001214 GO:0005515
Mepo3g03789 388 FunFam Putative histone-lysine N-methyltransferase EZH2 137 353 - -
Mepo3g03789 388 MobiDBLite consensus disorder prediction 1 21 - -
Mepo3g03789 388 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 9 386 IPR045318 GO:0006338|GO:0042054
Mepo3g03789 388 SMART CXC_2 176 208 IPR033467 -
Mepo3g03789 388 CDD SET_EZH 236 352 - -
Mepo3g03789 388 ProSiteProfiles SET domain profile. 236 351 IPR001214 GO:0005515
Mepo3g03789 388 ProSiteProfiles CXC domain profile. 123 222 IPR026489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03789 Mepo-Chr3 47362074 47365140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03789 225 351 C2H2 Transcription Factor Family AT2G23740 32.639 5.45e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g03789 SET 3.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03789 - - mtr:11420993 762.681