Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03786 ATGGACAGTAATGCCTCCCCCAAACTTGAGTCAGAAACATCTTTAGAGCTCAAACCAGAATCTCAAGTATCTAAGAAACGGAAAATGGTTGAGAAAACGGTTGTGACTGTGAGGATTGGAGAGAATGTTAGCAAGGTGAAGAATGAAGGACTTCCTTCAGATTTTTGGTCTTGGAGGAAATACGGACAAAAACCAATCAAAGGCTCTCCATATCCAAGGGGATATTATAGGTGCAGCACATGCAAGGGCTGTTCAGCCAAAAAACAAGTAGAGAGAAGCAGCACAGATGCTTCATTGCTCATCATCACCTATACTTCAACACATAACCATCCAGATCCCACTGCCCTCTCCTCCACCACAAATTTAGCTCAACAACCAAAAGAATCTGAAACCGAAACAATCAAAGATCTCCCAGTTACTTCTAAGGAAGAAAACCAAGAACAGAAACAGATAGAAGAGGAAATTAACAGTAATAAGAGCACTGTGAGTAGTGATCAAGTTACAAATGAAGAAAATTTTCATTACTTACAATCCCCAACACACTGCTCAGAGGACATCATTATAGACCAAGAAGATCCTTTCAAACTAAATATGGAAAAAAGCCACATTGACAAAATAGATCTTCTCTTAGAGGAAGAGCCACTCTGCTATGCACAGTTAAAGAATTTGTCAGCATCTAAATCAGAAGAATTTGATTTTTTCGATGAGCTTGAGGAGTTACCTATGTCTTCATCTATTTTACACTTTACGAGGAGCATTTTTTCTGATGAAAGGATTCCTGTTGCCCCTTCTTGA 795 0.3912 MDSNASPKLESETSLELKPESQVSKKRKMVEKTVVTVRIGENVSKVKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTCKGCSAKKQVERSSTDASLLIITYTSTHNHPDPTALSSTTNLAQQPKESETETIKDLPVTSKEENQEQKQIEEEINSNKSTVSSDQVTNEENFHYLQSPTHCSEDIIIDQEDPFKLNMEKSHIDKIDLLLEEEPLCYAQLKNLSASKSEEFDFFDELEELPMSSSILHFTRSIFSDERIPVAPS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03786 264 MobiDBLite consensus disorder prediction 108 148 - -
Mepo3g03786 264 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03786 264 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03786 264 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03786 264 Gene3D WRKY domain 38 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g03786 264 MobiDBLite consensus disorder prediction 13 28 - -
Mepo3g03786 264 MobiDBLite consensus disorder prediction 129 148 - -
Mepo3g03786 264 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 14 244 IPR044810 GO:0003700
Mepo3g03786 264 MobiDBLite consensus disorder prediction 1 28 - -
Mepo3g03786 264 MobiDBLite consensus disorder prediction 108 128 - -
Mepo3g03786 264 FunFam WRKY transcription factor 65 25 113 - -
Mepo3g03786 264 SUPERFAMILY WRKY DNA-binding domain 48 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03786 Mepo-Chr3 47331666 47333956 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03786 1 114 WRKY Transcription Factor Family AT2G34830 54.783 1.64e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g03786 WRKY 9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03786 - - gmx:100127368 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03786 3 47331666 47333956 Mepo3g03786 3 47331666 47333956 ECH