Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03784 ATGGAAATTGACCATTTTTCTTCCACTCATGACTTTGTAGAAGAAGTTGTGTTCCAAGACAAACAACATAGTTTTTCTGGAATACAATTGTTGGAAGAAATTAACAATCCTCTTCCAAAAGATAATGAACATGTACCCAACATGTTCAACAACCAAAATCATGATCAACAACAACAAGAATTCGAAGTTGGTAATTTCATATCATTATTAGAAGATATCAACTTAGAAACTAATCAAGAAAAGAATCATCACCACAAAGTTCCAATTCCAAAACCTTTAGAAAACAATATTCAGAAGATGCCACAATATTTATCATCCTTAGAGATTCTGAGAAATCATGGAAGCAGATTCAACAGGAAAAACACAATCAATACTAAAGCTTCTTCAAATTTGGAACAACGTCAAAAGATGTCAACAGAAGGAATAATAAGAGTAGCTGGAGCAAGGTATACTCAATATTCTTCTTCTCATTGGAGTGATAATTTTTGCATCCAAACACACCCTTATGGATTTGACCTTAATGGTTTATCTGAGGAAGAAAATAGAGACATTGAACTAGCACAGTTTCTTTATGTAGCAGCTGAAAGAGTAAGTTTGCAACAATATGAACGTGCAAAGAAATTACTTTTATATTGTCAATGGAATTCTTCTATCACAGGAAATTGTGTTCAAAGAATTGTCTTTCATTTTGCACAAGCACTTCAAGAGAGAATAGAGAAAGAAACAGGAAGAGTGATTAAAGGGTCAGATAAAAATGAAGAAAGTGAGTTACTTGATAAGATGGGTTCAAAAAAAGCACTTATGTGTCATCAAAAACTTCCTTTTAATCAAGTTATGCAATTTACTGGAATACAAGCTATAATTGAACATGTTAAGTTTGAGACTAAAATTCATCTAATTGATTTTGATATAAGAAGTGGGGTCCAGTGCATAGCTTTGATGCAAGCACTTGCTGAGAGACAGGATTGCATGGTTGAAATTTTTAAGGTAAGTGCTATTGGACTTAATACATGCAAGAACAAAATTGAAGAAACTGGCAAAAATTTATCTAGTTTTGCTGAATCATTGAACTTGCCCTTTTTATATAAACCTGTTTTAGTAGAAGATATGTTGGAAATCAAAGAAGATGATTTTGAAATTGAAAAGGATGAAGCTGTTGCTGTTTATTCTCCATATTTTCTAAGGACTTTAATATCAAGGCAGGATTCTATGGAAAATTTGATGAGAGTTTTGAGATATATCAAACCATGTATAATGATAGTACTTGAAACTGAAGCAAGTCTTAATTCGCAGTCTTTTGTGAACCGATTCGTTGAAGCGTTGTTCTTCTACTCGGCTTTTTTCGATATGGCTGAAACATGTATGAGTGAGGAGGATGAGTGTAGAATGATAACAGAAGGAATATTATCTGCAGGGATAAGAAATATTGTTGCGTCAGAAGGTAGAGAAAGGACTGTTAGAAATGTGAAAATTGATGTTTGGAGAAGATTCTTTGCAAGGTATAGAATGGTGGAAACTAGGTTTAGTGAGGCATGTGTTTACCAAGCTGAATTGGTGGGTAAAGAGTTTGATCATGGGAAATTTTGCGATGTGGAAAAGAATGGGAAGTGTTTGATATCGGGATGGAAGGGGACTCCAATGTATTCAATCTCAGCTTGGAGGTTTCTTTGA 1671 0.3381 MEIDHFSSTHDFVEEVVFQDKQHSFSGIQLLEEINNPLPKDNEHVPNMFNNQNHDQQQQEFEVGNFISLLEDINLETNQEKNHHHKVPIPKPLENNIQKMPQYLSSLEILRNHGSRFNRKNTINTKASSNLEQRQKMSTEGIIRVAGARYTQYSSSHWSDNFCIQTHPYGFDLNGLSEEENRDIELAQFLYVAAERVSLQQYERAKKLLLYCQWNSSITGNCVQRIVFHFAQALQERIEKETGRVIKGSDKNEESELLDKMGSKKALMCHQKLPFNQVMQFTGIQAIIEHVKFETKIHLIDFDIRSGVQCIALMQALAERQDCMVEIFKVSAIGLNTCKNKIEETGKNLSSFAESLNLPFLYKPVLVEDMLEIKEDDFEIEKDEAVAVYSPYFLRTLISRQDSMENLMRVLRYIKPCIMIVLETEASLNSQSFVNRFVEALFFYSAFFDMAETCMSEEDECRMITEGILSAGIRNIVASEGRERTVRNVKIDVWRRFFARYRMVETRFSEACVYQAELVGKEFDHGKFCDVEKNGKCLISGWKGTPMYSISAWRFL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03784 556 ProSiteProfiles GRAS family profile. 177 554 IPR005202 -
Mepo3g03784 556 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 548 IPR005202 -
Mepo3g03784 556 Pfam GRAS domain family 187 554 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03784 Mepo-Chr3 47320307 47322193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03784 176 555 GRAS Transcription Factor Family AT3G03450 28.165 3.41e-43 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo3g03784 GRAS 1.4e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03784 - - gmx:100791952 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03784 3 47320307 47322193 Mepo3g03784 3 47320307 47322193 ECH