Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03782 ATGGTCTCGGGTGCTACAAGCTCAGCGTCTAGACTTCAAGAAAAACATGGAGGGGGAGCAACAATTACTCGTCAAACCTTGGCGAACAAGATACATTTGGTGAAAAGGCAAATCCAAAATGAACGAGCTGAATCGATTAAAGAAAAGCTTCAGAAGAATAGGGAGAATCTTCAAAGTCAAATTTCTAAGGCCATGTTAGTAATATCAAAAAATGAATCATTACCAAGTGGAGGAAATATTCTTTCTTCAAGAATGAATCGTCCTTTTTGCACGTTCTATAGTCCTGGTCATCAACCCGATCATCAAGTTTTGGGAGAGGAAGACCATATCAACAAACCTGTGAGAACTATCAGGATGCCAAGCATCAACAGGTTACCTCCATATACGTCTTGGATACATTTAGCCAGAAATGAAAAAATGACTGCAGATCAAGCAGTTTCTAAAAAAAGAAATGTATATTACGATCATCAGGAAGGTGAAACATTAGTATGCAGTGATAGTGATGAAGAGTCAGACGAGCACAAGGAAGTTGAACGTAAATTTTCTCAGGGTGAAGACCGATTTATTAGGACGGTATTTGATGAACATGGTTTAACCGAGGAAGTGTTGAGTATTGTTAAGGATGTCATCGGAGGTACCAGTTCAGAAATTCAGGAGCGATATAAATATATCAAGGAAAAGGACCAAAATGATGAAGATCGTAGAGAAAGTGAATCTCAGACTGATATAAGCTTGAACAAAAGCTTGAGTGCCTCTTTAGATACTTTTGACCACTTTTACTGTCGTCGTTGCATGATCTTTGATTGTCCTTTGCACGGTTGTTCTCAAAAGATAATATATCCATTCGAAAAGCAACCAGTTTGGTCGGAACCTGAAGGTCCCAAAGAACCATGTGGTGATCATTGTTACCTTCATAATAAAGATGTCACAATTAGTAATTGTATGAGGGGCTTAAATTTGGATGCTAACAATGATGAAAAAAATGATATGGATGAAACAAAATCCAAGCACTTGTCTGACTCAATAGAAGGACAAGCTGAGGAGGAGTCTATTCATTCGGATTGGGAACTTTTGGAAAAAGAATTATACTTGAAGGGAATAGAAATGTTTGGGAGAAATAGTTGTCTTATAGCTAAGAACATACTTTTTATGATGAAGACTTGTTCGGAAGTTGCTAGATACATGTATGCTGAAGTGTCAATGCCACATGGATCCATGGACGAAAATGGGCAATCAAATGCAATGTGCATTGACAATGAGATGCCATCAAAGTCAAGGTCGATGGCAAGAAAGAACAAATCTAAGAAGTTCAAATATTCTTCAAAATCTTGTGGACTTCCATCTAAATGGAAAAGAAGAAGAAATACTGATGAGAAAAACAAACTGGAAAAGCACTATACACCTTGTGAATGTGAGGGAGCGTGTGGAAAGCAATGTCCATGTCTTCTTAATAGTTCTTGCTGTGAAAAATACTGTGGGTGTTCAAAGCTCTGTAAAAATCGATTTGGAGGATGTCAGTGTACTAAGAGTCAGTGTAGAAGTCGACACTGTCCATGTTTTGCAGCTTCAAGAGATTGTGACCCTGATGTATGTCGAAATTGTTGGGTTAGTTGTGGAGATGGTAACTTGGGAGAGTCGTCTCATCGTGGAGAGGATCAATGTGAAAACATGATGCTTCTTTTAAGGAAACAACAAAAGATTCTATGGGCAAGGTCTGATGTTGCTGGATGGGGAGCTTTCTTAAAGGCCCCAGCAAACAAAAATGATTTTTTAGGAGAGTACACTGGTGAAGTAATCTCTCATATAGAAGCTGATAAGCGTGGAAAATTTTATGATCGTGTAGACTTTTCGTACCTTTTTAACTTGAATGATACGTATTGTCTTGATGCTTTTCGCAAAGGGAACAAGTTGAAGTTTGCAAATCACTCATCAAAAGCGAATTGCTATGGAAAGATTGTGTTTGTTAATGGGGATCATCGAGTAGGAATATTTGCAAAGGAACGCATTGAAGCTGGGGAGGAGCTTTTCTTTGATTACGGGTATGATGAAGACAGTCGACCACCATGGCTTCATAAACTTCTAGATGATGGTTCCAAGGAAGATGATGATCCAACATTTTATCAAGGAAAAGCCAAGAAACATTGCTCTCGCTGA 2154 0.3849 MVSGATSSASRLQEKHGGGATITRQTLANKIHLVKRQIQNERAESIKEKLQKNRENLQSQISKAMLVISKNESLPSGGNILSSRMNRPFCTFYSPGHQPDHQVLGEEDHINKPVRTIRMPSINRLPPYTSWIHLARNEKMTADQAVSKKRNVYYDHQEGETLVCSDSDEESDEHKEVERKFSQGEDRFIRTVFDEHGLTEEVLSIVKDVIGGTSSEIQERYKYIKEKDQNDEDRRESESQTDISLNKSLSASLDTFDHFYCRRCMIFDCPLHGCSQKIIYPFEKQPVWSEPEGPKEPCGDHCYLHNKDVTISNCMRGLNLDANNDEKNDMDETKSKHLSDSIEGQAEEESIHSDWELLEKELYLKGIEMFGRNSCLIAKNILFMMKTCSEVARYMYAEVSMPHGSMDENGQSNAMCIDNEMPSKSRSMARKNKSKKFKYSSKSCGLPSKWKRRRNTDEKNKLEKHYTPCECEGACGKQCPCLLNSSCCEKYCGCSKLCKNRFGGCQCTKSQCRSRHCPCFAASRDCDPDVCRNCWVSCGDGNLGESSHRGEDQCENMMLLLRKQQKILWARSDVAGWGAFLKAPANKNDFLGEYTGEVISHIEADKRGKFYDRVDFSYLFNLNDTYCLDAFRKGNKLKFANHSSKANCYGKIVFVNGDHRVGIFAKERIEAGEELFFDYGYDEDSRPPWLHKLLDDGSKEDDDPTFYQGKAKKHCSR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03782 717 Pfam CXC domain 504 535 IPR041355 -
Mepo3g03782 717 Pfam SET domain 576 680 IPR001214 GO:0005515
Mepo3g03782 717 SMART set_7 565 686 IPR001214 GO:0005515
Mepo3g03782 717 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 331 715 IPR045318 GO:0006338|GO:0042054
Mepo3g03782 717 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 717 IPR025778 GO:0031519
Mepo3g03782 717 SMART CXC_2 505 537 IPR033467 -
Mepo3g03782 717 MobiDBLite consensus disorder prediction 1 21 - -
Mepo3g03782 717 Coils Coil 24 67 - -
Mepo3g03782 717 CDD SET_EZH 565 681 - -
Mepo3g03782 717 Gene3D SET domain 466 682 IPR046341 -
Mepo3g03782 717 FunFam Putative histone-lysine N-methyltransferase EZH2 466 682 - -
Mepo3g03782 717 ProSiteProfiles SET domain profile. 565 680 IPR001214 GO:0005515
Mepo3g03782 717 MobiDBLite consensus disorder prediction 323 345 - -
Mepo3g03782 717 ProSiteProfiles CXC domain profile. 452 551 IPR026489 -
Mepo3g03782 717 MobiDBLite consensus disorder prediction 693 710 - -
Mepo3g03782 717 SUPERFAMILY SET domain 435 685 IPR046341 -
Mepo3g03782 717 MobiDBLite consensus disorder prediction 693 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03782 Mepo-Chr3 47306394 47312745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03782 554 680 C2H2 Transcription Factor Family AT2G23740 32.639 2.31e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g03782 SET 8.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03782 - K11430 mtr:11420993 1263.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03782 3 47306394 47312745 Mepo3g03782 3 47306394 47312745 ECH
Mepo3g03782 3 47306394 47312745 Mepo4g03613 4 45496605 45506870 PCT