Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03767 ATGGGAAGAGCTCCTTGTTGTGAGAAAGTGGGTTTGAAGAAGGGAAGATGGACCGCAGAGGAGGATGAAATTTTGACCCAATATGTTAAGGCAAATGGGGAAGGTTCTTGGAGGTCATTGCCCAAAAATGCAGGTTTGCTTAGATGTGGGAAAAGTTGTAGATTAAGATGGATTAACTATTTGAGAGCTGATCTCAAAAGGGGAAATATTTCTGCTGAAGAGGAAAGTATTATTGTCAAGATGCATGCTTCTTTTGGTAACAGGTGGTCCTTGATTGCAAGTCACTTGCCAGGCAGAACAGACAACGAGATTAAAAACTACTGGAACTCACACTTGAGTAGGAAAGTTTACAGCTTCCGAGGAACATCAACAAATTATAATAATTCAAATTCCAATAATATCAAAGAGATAGAGATTCCATCAGAAAGAATCATTGTGGATACACCTCCCAAACGTAAAGGTGGTAGAACTAGTCGATGGGCTATGAAGAAGAACAAACGATATATATCCCAAAATGTTCTCCAAAGAAGTGAACCTACTGCAATTGTTACACCTCCTGCACTAGAGACCGAGAAAATGGTTATGGGCTCAGTAAATGGGCCTTGTTCTAGCGGTGAAGATGGCCCAAATGGGTTGCAGTTACCTTTCATTGACGGTGAAAATAATAGTATTGAAGCTGATTTTGACCGCATGTTGGGACCAGAACTGAAGGTCATTAATGATGGTGAGTTGTTAGATTTTAATGATATTATCATGGATACTTTGGAGGTGGAAGAAGAAAAAGAAAGTAATGATGAAAATGTGGTTGTGATTAATGAAAGAGTGGTGGGGGACAAAGGCACCAACACAAATGGAACAAAGGGCATAGAGAGAAATGATAATGTCACGAATCAATGTTCCAATGAGGAGTTAAATTCTTCTACTTCAAGGACTTCGGGTTTGGATGATAACTTGGATTGGGAGAGTGTTATGCCATTGTTGAATCAGAAAGGTCAATCGTTGTTGTGGGAGCAAGATGAAAACATGCTGACTTGGTTGTTGGATGATGATCAATGGGAAAAGGATTTTCAGAGATTTCGAGATATTGATCCTCAGAAGCAAAATGCTTTGGTTTCTTGGTTTTAA 1125 0.3938 MGRAPCCEKVGLKKGRWTAEEDEILTQYVKANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISAEEESIIVKMHASFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKVYSFRGTSTNYNNSNSNNIKEIEIPSERIIVDTPPKRKGGRTSRWAMKKNKRYISQNVLQRSEPTAIVTPPALETEKMVMGSVNGPCSSGEDGPNGLQLPFIDGENNSIEADFDRMLGPELKVINDGELLDFNDIIMDTLEVEEEKESNDENVVVINERVVGDKGTNTNGTKGIERNDNVTNQCSNEELNSSTSRTSGLDDNLDWESVMPLLNQKGQSLLWEQDENMLTWLLDDDQWEKDFQRFRDIDPQKQNALVSWF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03767 374 FunFam Myb transcription factor 71 116 - -
Mepo3g03767 374 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo3g03767 374 CDD SANT 16 61 IPR001005 -
Mepo3g03767 374 FunFam Myb transcription factor 11 67 - -
Mepo3g03767 374 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo3g03767 374 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo3g03767 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo3g03767 374 Gene3D - 70 141 - -
Mepo3g03767 374 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo3g03767 374 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 145 - -
Mepo3g03767 374 CDD SANT 71 112 IPR001005 -
Mepo3g03767 374 Gene3D - 11 67 - -
Mepo3g03767 374 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo3g03767 374 SMART sant 13 63 IPR001005 -
Mepo3g03767 374 SMART sant 66 114 IPR001005 -
Mepo3g03767 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03767 Mepo-Chr3 47148976 47151992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03767 1 220 MYB Transcription Factor Family AT5G49330 56.951 7.00e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g03767 Myb_DNA-binding 4.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03767 K09422 - gmx:100814275 308.531