Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03757 ATGGCAACGAGAAATCGAACAGTAGAGTTCAGAAAGTACAGAGACAGCGTCAAAAGCCTACGCACTCCTCTTTCTTCATCAGCTTCTGCTTCTTCCGGTGGTGGTCCTGTCATTGAAATGGTCAACACTTCGCTTCTTCGTACCAATAATGGATCTTCTTATACTCCTCTCAGTACCCATGATCCTGGTCCTTCTTCCTCAAGTGATGCATTTACTGTGGGTTTGCCGCCAACTTGGGTGGATGATTCTGAAGAAATAGCTACAAATATACAAAGTGCAAAGGTTAAAATGTCTGAGTTAACAAAAGCTCATGCAAAGGCTTTGATGCCTTCCTTTGGTGATGGTAAAGATGATCAACGTCAGATTGAGACTCTCACCCGGGAAATTACGGCTCTCCTCAGGAAGTCTGAAGTGAGGCTAAAAAGACTTTCTGCTGGTAGAGGGTCTTCTGAGGATTCTAATGTCAGAAAAAACGTGCAGCGTTCACTTGCTACAGACCTTCAAAACCTGTCAATGGACCTCCGGCGGAAGCAGTCAACATATTTGAAACGTTTGCAGCAGCAACAAGAGGGTTATGATGGGATTGACTTGGAAATGAACTTTAAAGGGAGTAGCTCTGGATTGCAGGATGATGGATTCGATGATGTGGGTTTTAGTGAAGAGCAAATGACAAAGCTAAAGAAAAATGAACACATCTCAGCGGAAAGAGAAAGAGAAATTGATCAGGTCGCTAAATCAGTCCACGAACTTGCTCAGATCATGAAGGATCTCTCCGTTCTTGTTATAGACCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAGAGTGTTGCTACAACCGTTGAGGAGGGCTTGAAGCAGTTGCAAAAGGCAGAAAGAACACAGAAAAAAGGAGGGATGATTACATGTGCGACAGTGCTTGTTATCATGTGCTTTGTCATGCTAGTTCTGTTGATCCTCAAGGAGATAATATTCTAG 981 0.4312 MATRNRTVEFRKYRDSVKSLRTPLSSSASASSGGGPVIEMVNTSLLRTNNGSSYTPLSTHDPGPSSSSDAFTVGLPPTWVDDSEEIATNIQSAKVKMSELTKAHAKALMPSFGDGKDDQRQIETLTREITALLRKSEVRLKRLSAGRGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQSTYLKRLQQQQEGYDGIDLEMNFKGSSSGLQDDGFDDVGFSEEQMTKLKKNEHISAEREREIDQVAKSVHELAQIMKDLSVLVIDQGTIVDRIDYNIQSVATTVEEGLKQLQKAERTQKKGGMITCATVLVIMCFVMLVLLILKEIIF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03757 326 SMART tSNARE_6 225 292 IPR000727 -
Mepo3g03757 326 SUPERFAMILY t-snare proteins 75 285 IPR010989 GO:0016020|GO:0016192
Mepo3g03757 326 MobiDBLite consensus disorder prediction 49 68 - -
Mepo3g03757 326 ProSitePatterns Syntaxin / epimorphin family signature. 236 275 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mepo3g03757 326 FunFam Syntaxin-43 76 284 - -
Mepo3g03757 326 SMART SynN_4 70 186 IPR006011 GO:0016020
Mepo3g03757 326 Pfam SNARE domain 266 318 IPR000727 -
Mepo3g03757 326 CDD SNARE_syntaxin16 234 291 - -
Mepo3g03757 326 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 230 292 IPR000727 -
Mepo3g03757 326 Gene3D - 76 284 - -
Mepo3g03757 326 PANTHER SYNTAXIN 81 312 IPR045242 -
Mepo3g03757 326 MobiDBLite consensus disorder prediction 16 37 - -
Mepo3g03757 326 MobiDBLite consensus disorder prediction 19 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03757 Mepo-Chr3 47092225 47097667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03757 1 326 SNARE and Associated Proteins AT4G02195 67.584 2.56e-157 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03757 K08489 - gmx:100803629 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03757 3 47092225 47097667 Mepo3g03757 3 47092225 47097667 ECH
Mepo3g03757 3 47092225 47097667 Mepo4g03450 4 43909186 43914550 ECH