Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03754 ATGTCTTCCTCCGATGCCCATACCCCACCCACTAATAATATCAACCCCAAATGTATCCTCTTCAATGCTGCATCCGGTGCTTCCGCCGGAGTTATTGCTGCTACGTTTGTGTGTCCTTTAGATGTTATCAAAACTAGGTTTCAAGTTGGTGTGCCCCAGCTCGCTAATGGAACTGTTAAAGGTAGTGTGATAGTGGCTAGTTTACAACAAATATTCCACAAGGAGGGGTTACGCGGCATGTACCGTGGGCTGGCTCCCACTGTGTTAGCTTTGCTTCCAAATTGGGCGGTTTATTTTACTATGTATGAGCAGCTCAAAAGCCTTCTTCATTCTGATGATGAAAGCCATCACCTTTCAGTTGGATCTAATATGGTTGCTGCTGCTGGTGCTGGAGCTGCAACTACCTTGTTTACAAATCCACTCTGGGTTGTCAAGACTAGACTTCAAACCCAGGGAATGAGATCTGGTGTTGTGCCATATAGGAGCACACTATCTGCATTGAGGAGAATTGCTAGTGAGGAGGGCATACGGGGGCTTTACAGTGGCCTTGTACCTGCTCTAGCTGGTATCAGTCATGTTGCCATTCAATTCCCGATGTATGAAACAATTAAATTTTATTTAGCAAATCAAGATGACGCAGCAGTCGATAAACTTGGTGCACGTGATGTTGCTATTGCTTCATCAGTCTCCAAAATTTTTGCATCCACATTGACATATCCCCATGAGGTTGTACGTTCCAGATTGCAAGAACAAGGGCATCACTCTGAGAAACGATACTCTGGTATGATTGACTGCATTAGAAAGGTTTTTCAACGAGAAGGTGTACCTGGCTTTTACCGAGGATGTGCCACCAACCTTCTGAGGACAACACCAGCTGCCGTAATCACATTCACCAGCTTTGAAATGATACACCGTTTTCTTGTTTCACATTTTCCTTCTGATCCACAACCTCATATTTTATGA 963 0.4434 MSSSDAHTPPTNNINPKCILFNAASGASAGVIAATFVCPLDVIKTRFQVGVPQLANGTVKGSVIVASLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTMYEQLKSLLHSDDESHHLSVGSNMVAAAGAGAATTLFTNPLWVVKTRLQTQGMRSGVVPYRSTLSALRRIASEEGIRGLYSGLVPALAGISHVAIQFPMYETIKFYLANQDDAAVDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGMIDCIRKVFQREGVPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSHFPSDPQPHIL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03754 320 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 114 - -
Mepo3g03754 320 Pfam Mitochondrial carrier protein 118 209 IPR018108 -
Mepo3g03754 320 Pfam Mitochondrial carrier protein 22 111 IPR018108 -
Mepo3g03754 320 Pfam Mitochondrial carrier protein 224 309 IPR018108 -
Mepo3g03754 320 PRINTS Mitochondrial carrier protein signature 22 35 IPR002067 GO:0055085
Mepo3g03754 320 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085
Mepo3g03754 320 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Mepo3g03754 320 PRINTS Mitochondrial carrier protein signature 35 49 IPR002067 GO:0055085
Mepo3g03754 320 PRINTS Mitochondrial carrier protein signature 133 151 IPR002067 GO:0055085
Mepo3g03754 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 306 IPR018108 -
Mepo3g03754 320 SUPERFAMILY Mitochondrial carrier 20 302 IPR023395 -
Mepo3g03754 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 108 IPR018108 -
Mepo3g03754 320 Gene3D Mitochondrial carrier domain 19 310 IPR023395 -
Mepo3g03754 320 FunFam NAD+ transporter 116 311 - -
Mepo3g03754 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 206 IPR018108 -
Mepo3g03754 320 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 21 309 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03754 Mepo-Chr3 47077025 47083880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03754 3 314 Chloroplast and Mitochondria Gene Families AT2G47490 75.080 6.14e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03754 K15115 - gmx:100500213 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03754 3 47077025 47083880 Mepo3g03754 3 47077025 47083880 ECH