Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo3g03748 | ATGGGAACGCGACTGCGGAAATCATGTGTAGATGAAAGCAGGAGTGCTGGTTTTCCATCTAGCCGGAGGGAGCAGATGACGCAGACAGCCGCTGCTCTCAAATTAAACCATCTTGACATACATGATGATGATGCAGGATCACAAGGAGCAGTTGTTAGCAAGAAGAAAAAGAGGGGCCAACAACGGGATGCTAGAAAAAATAAGAGTAGAAGAGGGCTCCTCCAAATTAGCATGAAAGTGTTGGAGAAGGTAGAAAGTAAGGGAAGAACAACTTTCAATGAGGTGGCAGATGAACTTGTGGCTGAACTTGCTGATCCAATGAATAGTGTTTTTTCCCCTAATAAGCAACAATATGATGAGAAAAATGTCCGTCAAAGGGCCTATGATGTTCTGAATGTTCTCATGGCAATGGATATTATTTCCAAGGATAAAAAGGAAATACAGTGGAAGGGTCTTCCTCCTAATGCTATTGAGAAGCTAAAGATCGAACGTCTAGGGATCAGGAATAGAGTTGAAAGCAAAGCATCCTATCTAAAGGAGCTTGAGGAACAAGTAAGTCCATTCCACTCTCTAATAGATTTAATACGGGGATGA | 594 | 0.4226 | MGTRLRKSCVDESRSAGFPSSRREQMTQTAAALKLNHLDIHDDDAGSQGAVVSKKKKRGQQRDARKNKSRRGLLQISMKVLEKVESKGRTTFNEVADELVAELADPMNSVFSPNKQQYDEKNVRQRAYDVLNVLMAMDIISKDKKEIQWKGLPPNAIEKLKIERLGIRNRVESKASYLKELEEQVSPFHSLIDLIRG | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo3g03748 | 197 | PANTHER | TRANSCRIPTION FACTOR DP | 16 | 192 | IPR015648 | GO:0005667|GO:0051726 | |
Mepo3g03748 | 197 | MobiDBLite | consensus disorder prediction | 41 | 71 | - | - | |
Mepo3g03748 | 197 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Mepo3g03748 | 197 | Gene3D | - | 61 | 158 | IPR036388 | - | |
Mepo3g03748 | 197 | SMART | E2F_TDP_2 | 68 | 151 | IPR003316 | GO:0005667|GO:0006355 | |
Mepo3g03748 | 197 | SUPERFAMILY | E2F-DP heterodimerization region | 156 | 193 | IPR037241 | - | |
Mepo3g03748 | 197 | Pfam | E2F/DP family winged-helix DNA-binding domain | 71 | 151 | IPR003316 | GO:0005667|GO:0006355 | |
Mepo3g03748 | 197 | FunFam | Transcription factor-like protein DPB | 63 | 156 | - | - | |
Mepo3g03748 | 197 | SUPERFAMILY | "Winged helix" DNA-binding domain | 71 | 152 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo3g03748 | Mepo-Chr3 | 47027036 | 47030621 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo3g03748 | 40 | 192 | E2F-DP Transcription Factor Family | AT5G02470 | 44.025 | 1.43e-33 | 119 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | E2F-DP | Mepo3g03748 | E2F_TDP | 8.3e-17 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo3g03748 | K04683 | - | gmx:100781272 | 242.276 |