Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03736 ATGGCTTCCAAGTTATGTAATCCCCTCTCAATATTTCTCATTCTTTTATCTGTATCTATAGCTTTTTCACAAAACACCGTTACTAGTCCAAATCCAATTACACCTATTTCACCAGGAGCAGCATGCAAATCCACCCCAGACCCAACCTATTGCAAATCCATCCTCCCCCCTCAAAATGCCAACGTTTATGATTATGGTCGATTCTCAGTCAAAAAATCACTGTCACAATCCCGAAAATTCTCAGACCTAATCAACAAATATCTCCAACGTCGCTCCACTCTTTCCACCACCGCTGTGCGAGCACTACAAGATTGCCAATCGCTCAGCGACCTCAACTTTGATTTCCTTTCAAGCTCTTTCCAAACTGTCAACAAAACAACAAAGTTTCTTCCAAACTTACAAGGTGAAAACATCCAAACATTGCTCAGCGCGATTCTGACAAACCAACAAACTTGTTTGGATGGTCTTAAAGACACTTCTTCAGCTTGGAGTTTTCGAAATGGACTCACAATCCCACTTTCTAATGACACCAAACTCTATAGTGTCTCTCTTGCTTTCTTCACGAAAGGCTGGGTTAATCCCAAAACCAACAAAACAGGGTTTCCTAATTCCAAACACTCTAACAAAGGATTTAAAAACGGGCGTCTACCACTTAAGATGACGAGCAAAACACGCGCGATTTATGAGTCAGTTAGTCGGAGAAAGCTTCTTCAGAGTGATCAAGTTGGTGAGGATGTTGTGGTGAGAGATATTCTGACGGTTAGTCAAGATGGAAGTGGAAACTTTACGACGATTAACGATGCCATTGCTGCAGCTCCAAATAAATCTGTGTCTAGTGATGGGTATTTTTTGATTTATGTTACTGCTGGTGTTTATGAAGAATATGTTACTATTGATAAGAAAAAGACTTATTTGATGATGATTGGAGATGGTATCAACAAGACTATTATCACTGGCAATCACAGTGTTGTTGATGGCTGGACCACATTCAGCTCGCCAACATTCGCTGTGGTTGGGCAAGGATTCGTGGGTGTGAACATGACCATCCGTAACACAGCAGGTGCTGTGAAGCACCAAGCAGTGGCACTTAGAAACGGGGCAGATTTGTCAACATTTTACAGTTGCAGTTTCGAAGGGTACCAAGACACATTATACACACATTCACTAAGACAATTCTACAGAGAATGTGACATTTACGGAACAGTAGATTTCATATTCGGAAATGCTAAGGTTGTTTTCCAAAATTGTAACCTCTATCCACGTCTTCCAATGAGTGGACAATTCAATGCAATCACTGCACAAGGAAGGACAGACCCAAACCAAGACACAGGTACATCAATCCACAACTGTACAATTAAAGCGACCGATGATTTAGCTGCTAGCAATGGTGCTGTTTCAACATATTTGGGAAGACCATGGAAAGAGTATTCTAGAACTGTTTACATGCAAACATTTATGGATAATGTGATTAATGTTGCTGGGTGGCGTGCTTGGGATGGAGAATTTGCATTGAGCACATTGTATTATGCTGAGTTTAATAATAGTGGGCCAGGATCTAGCACTGATGGTAGAGTGACGTGGCAAGGTTATCATGTGATTAATGCCACGGATGCAGCTAATTTTACGGTGGCAAATTTCTTGCTTGGTGATGACTGGTTGCCTCAAACAGGGGTGTCTTACACTAATTCCTTAATTAATTAA 1701 0.4109 MASKLCNPLSIFLILLSVSIAFSQNTVTSPNPITPISPGAACKSTPDPTYCKSILPPQNANVYDYGRFSVKKSLSQSRKFSDLINKYLQRRSTLSTTAVRALQDCQSLSDLNFDFLSSSFQTVNKTTKFLPNLQGENIQTLLSAILTNQQTCLDGLKDTSSAWSFRNGLTIPLSNDTKLYSVSLAFFTKGWVNPKTNKTGFPNSKHSNKGFKNGRLPLKMTSKTRAIYESVSRRKLLQSDQVGEDVVVRDILTVSQDGSGNFTTINDAIAAAPNKSVSSDGYFLIYVTAGVYEEYVTIDKKKTYLMMIGDGINKTIITGNHSVVDGWTTFSSPTFAVVGQGFVGVNMTIRNTAGAVKHQAVALRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAKVVFQNCNLYPRLPMSGQFNAITAQGRTDPNQDTGTSIHNCTIKATDDLAASNGAVSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNSGPGSSTDGRVTWQGYHVINATDAANFTVANFLLGDDWLPQTGVSYTNSLIN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03736 566 FunFam Pectinesterase 39 189 - -
Mepo3g03736 566 Pfam Pectinesterase 253 550 IPR000070 GO:0030599|GO:0042545
Mepo3g03736 566 PANTHER PECTINESTERASE 20 554 - -
Mepo3g03736 566 CDD PMEI-like_3 40 191 - -
Mepo3g03736 566 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Mepo3g03736 566 SMART PMEI_2 33 186 IPR006501 GO:0004857
Mepo3g03736 566 NCBIfam pectinesterase inhibitor domain 10 175 IPR006501 GO:0004857
Mepo3g03736 566 FunFam Pectinesterase 246 564 - -
Mepo3g03736 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Mepo3g03736 566 SUPERFAMILY Pectin lyase-like 249 561 IPR011050 -
Mepo3g03736 566 Gene3D - 246 564 IPR012334 -
Mepo3g03736 566 Pfam Plant invertase/pectin methylesterase inhibitor 40 185 IPR006501 GO:0004857
Mepo3g03736 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 189 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03736 Mepo-Chr3 46939793 46942361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03736 9 565 Carbohydrate Esterase AT4G02330 62.063 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03736 K01051 - gmx:100800971 929.087