Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03734 ATGTCTACTAGTACGGACCCAAACCTAGAAGCAAAGTATGCCCTTAACAGCAAGGTCATGATAGGATCTTCCATCCTTCTCTTCATACTCATACTCATCATCCTTCTCTTTCGCACTTACGTTTACATCTGCCACCTTCGCACCCGTCGTCTATTCTCTCAAGATTCTGTAACCACCACCACTTTCAAAGAAGAACGCCTTGACCCTTCCGTTCAAAAATCGCTTCCAACTTTTACTTACTCCTCCTCCGCCCGCCGTACTCTCCATGACTGTGCTGTCTGCTTGTCGGAGTTCACCGACGGTGATGAATGCCGTACGCTTCCGAACTGTAACCATGATTTTCATTCCCTGTGTATTCAACCGTGGTTTGCTTCTCATTCTAACTGCCCTCTCTGTCGAGCTCCGGTCCAGCCGGCGACTGTTCAGTTTTACACTGAAACGTGTACTGTTTCGGGTTCAGGAGAACCGGGCGAGGGTTGTTCTAATTTTCCTGAACCGGTTGGGTGTCCAAGAAAGTCGTTTAGTGTAATTGTAGAGTTACCACCAGAGGTTGTGCGGGTCGGATCTTGTACCCGAAGATAA 582 0.4811 MSTSTDPNLEAKYALNSKVMIGSSILLFILILIILLFRTYVYICHLRTRRLFSQDSVTTTTFKEERLDPSVQKSLPTFTYSSSARRTLHDCAVCLSEFTDGDECRTLPNCNHDFHSLCIQPWFASHSNCPLCRAPVQPATVQFYTETCTVSGSGEPGEGCSNFPEPVGCPRKSFSVIVELPPEVVRVGSCTRR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03734 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 139 IPR013083 -
Mepo3g03734 193 CDD RING-H2_EL5-like 90 133 - -
Mepo3g03734 193 SUPERFAMILY RING/U-box 90 139 - -
Mepo3g03734 193 SMART ring_2 91 132 IPR001841 -
Mepo3g03734 193 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
Mepo3g03734 193 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 13 138 IPR044675 -
Mepo3g03734 193 Pfam Ring finger domain 90 133 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03734 Mepo-Chr3 46933293 46934245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03734 13 137 Rapid Response to Elicitors AT3G16720 35.915 2.63e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03734 - - cam:101488632 224.557