Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03731 ATGGGTATCGATTTGAAGGCAGGAGGTAAGTCCAAGAAGACAAAACGTACCGCACCAAAATCCAATGATATCTACCTCAAGCTTCTCGTTAAGCTATACCGTTTCCTTGTTCGAAGGACTGAAAGTAATTTCAATAAGGTTATCCTTAAGAGGCTTTTCATGAGCAAAGTCAACAAGCCACCACTATCACTTTCTAGGTTGATCCGTTACACCAAGGGAAAGGAGGGTAAGATTGCTGTAGTTGTTGGTGCAGTGACAGATGACATTAGGGTTTATGAAGTACCTGCAATCAAGGTAACTGCTCTAAGGTTCACCGAAAAGGCCAGGGCTAGAATTGAGAAGGCTGGTGGGGAGTGTCTCACCTTTGATCAGCTGGCTCTTAGAGCTCCTTTAGGCCAGAACACGGTTCTTCTTAGAGGTCCCAAAAATGCTCGTGAGGCTGTCAAGCACTTCGGACGAGCTCCTGGTGTGCCACACAGCAACACTAAGCCCTATGTCCGAGGAAAAAAATCACGAAAGCTCAGTTGGTCACAGACACGAATGGCGAAGCAGTTGAGGCCAGTGACGAATACTTCATCAGGCCTGCTATCATGTCCTTTGGATGTCGGTCTTGAACAGAATTCTGACTTGCCAGGTTTGATTGTTATATTCGCACCTTTTTCTTCCAATCACAATGACGAAGATGCGAGGCTTAGTAGAGACTTGACAGTCCAATTCCGAACTTCAAATTGTGGGCAGTCATCAGAATGGAGATTGGGTGAGAGGGACGCAACGAGTGGTAGGAGGCTTATTACCACCGGAAGAGATGATAGAACAATTAGATCATTTGGTAACTTCTTTAGGATTGTACAGAGCCAAACTCTTAGTATCTATAACATCCAATGGTGCCCGACAGAAGTGTGCCCTAGTTGTTGGTTTGCATGTGGGACTGTTAGTATTATTCGTGAGAATGGCAGGAGTTTATTGGCCCTTGATGGTGGTGATGCCCTCCCTGTTGTGTTCCAGAAAGAATGA 1014 0.4546 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESNFNKVILKRLFMSKVNKPPLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPAIKVTALRFTEKARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSNTKPYVRGKKSRKLSWSQTRMAKQLRPVTNTSSGLLSCPLDVGLEQNSDLPGLIVIFAPFSSNHNDEDARLSRDLTVQFRTSNCGQSSEWRLGERDATSGRRLITTGRDDRTIRSFGNFFRIVQSQTLSIYNIQWCPTEVCPSCWFACGTVSIIRENGRSLLALDGGDALPVVFQKE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03731 337 Gene3D - 181 336 - -
Mepo3g03731 337 MobiDBLite consensus disorder prediction 152 172 - -
Mepo3g03731 337 Pfam Ribosomal protein 60S L18 and 50S L18e 2 182 IPR021131 -
Mepo3g03731 337 SUPERFAMILY STI-like 191 336 IPR011065 -
Mepo3g03731 337 SMART kul_2 183 337 IPR002160 GO:0004866
Mepo3g03731 337 Gene3D - 1 180 - -
Mepo3g03731 337 FunFam 60S ribosomal protein L18 1 186 - -
Mepo3g03731 337 Pfam Trypsin and protease inhibitor 193 336 IPR002160 GO:0004866
Mepo3g03731 337 PANTHER 60S RIBOSOMAL PROTEIN L18 1 178 IPR000039 GO:0003735|GO:0005840|GO:0006412
Mepo3g03731 337 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03731 Mepo-Chr3 46912775 46916780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03731 3 170 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.532 2.45e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03731 K02883 - gmx:100499789 313.153