Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03674 ATGGGTGGCTCTCCTAGAAACCCTAACCCTAACCCTTCACACAAACTATTTCGACCTTGTGATTATTGTGGCAATTCAAACGCAGTTATATACTGCAGAGCAGATTCAGCCAAACTCTGTTTCTCTTGTGATCGTGAAGTTCACTCCACAAATCAACTCTTTTCAAAGCACACACGCTCCTTAATCTGTGATTCATGCGATGATTCACCTTCTACTATACTCTGTTCTACAGAATCCTCTGTTTTCTGTCAAAACTGTGACTGGGAAAATCACAATCTTTCTCTCTCTTCACCTCATGAACGAAGGCCTCTTGAGGGTTTTACAGGGTGCCCTTCTGTTACCGAGCTTTTGTCGATTCTGGGTTTGCAGGATATTGGAAAAAAATCGTTGTTTTTGCCTCAGGAAAGTGTAGGAGATGGGTTTGTAGGGTATGAGATTGAAGGGCTTTCTGATATGTTTGTTTGGGATGCTCCTTCTTTTGTTAGTCTTGATGATCTTATTTCTTCTTCTCCTTCTTCTCATAATTATCGTGCTATGGAGGTTCCTCCTTTGCCCAAGAATCGTAAGGCTGCTTGTGGTAGACACAGAGAAGAGATTTTAAATCAGCTTCGTGAGATGACAAAGTCTGAGCCCTACGATCCTGAAGAGTATATACGACCGCCAAATTTATCTCCAGGTTTTGATTGCGACGTAAAGGCTGATATCGTTCCTTCAAATGAGTGGCTTAGAGAAAGCAGCGAGCCTATGTATCAAGTTGTTCCTGTTGATACATCATTCAAAGCTCATTCCGAAGAAATCTCACTTAAACATTCTGTATCTTCTGTTGGGGAGCCTCATACCCATTGTAACAACGGAGGGATGCCTTCAGAATCTCTCAAGTCTGAAATCTTGTCAACTACTCCTGAAGCTGTTCCTCCTCCGTATGAGTTAGCAAGTCAAGAAAGGGATTCTGCATTATTACGGTACAAGCAAAAGAAGAAAACAAGAAGATATGACAAGCATATAAGGTATGAATCACGTAAAGTTCGGGCGGAGAGCAGGACAAGAGTTAAGGGCCGATTTGCCAAGATAGAGCACTGA 1080 0.4213 MGGSPRNPNPNPSHKLFRPCDYCGNSNAVIYCRADSAKLCFSCDREVHSTNQLFSKHTRSLICDSCDDSPSTILCSTESSVFCQNCDWENHNLSLSSPHERRPLEGFTGCPSVTELLSILGLQDIGKKSLFLPQESVGDGFVGYEIEGLSDMFVWDAPSFVSLDDLISSSPSSHNYRAMEVPPLPKNRKAACGRHREEILNQLREMTKSEPYDPEEYIRPPNLSPGFDCDVKADIVPSNEWLRESSEPMYQVVPVDTSFKAHSEEISLKHSVSSVGEPHTHCNNGGMPSESLKSEILSTTPEAVPPPYELASQERDSALLRYKQKKKTRRYDKHIRYESRKVRAESRTRVKGRFAKIEH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03674 359 CDD Bbox1_BBX-like 19 62 - -
Mepo3g03674 359 ProSiteProfiles Zinc finger B-box type profile. 58 104 IPR000315 GO:0008270
Mepo3g03674 359 ProSiteProfiles Zinc finger B-box type profile. 20 62 IPR000315 GO:0008270
Mepo3g03674 359 ProSiteProfiles CCT domain profile. 315 357 IPR010402 GO:0005515
Mepo3g03674 359 SMART bboxneu5 63 104 IPR000315 GO:0008270
Mepo3g03674 359 SMART bboxneu5 15 62 IPR000315 GO:0008270
Mepo3g03674 359 Pfam CCT motif 315 356 IPR010402 GO:0005515
Mepo3g03674 359 CDD Bbox1_BBX-like 62 104 - -
Mepo3g03674 359 Pfam B-box zinc finger 61 104 IPR000315 GO:0008270
Mepo3g03674 359 Pfam B-box zinc finger 19 60 IPR000315 GO:0008270
Mepo3g03674 359 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 19 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03674 Mepo-Chr3 46421381 46424743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03674 14 330 C2C2-CO-like Transcription Factor Family AT2G47890 41.176 4.09e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mepo3g03674 zf-B_box 3.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03674 - - cam:101499146 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03674 3 46421381 46424743 Mepo3g03674 3 46421381 46424743 ECH