Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03626 ATGTTGAGTTTCAGAATGATGAACTTGTTGTCCCGTATCAAAACAAGAACAAAAAAGAAAATCAAAACAAAAAATCGAAACAAAAACCCTCACAAACTCAAAATTCAAAACCCCATTTCTTCCATTACCAAAAACCACCAATCTCTTGTTGAAGAAGAAGACACTGAAGAATGTTTCGACATCAAAAGCTCTGCCCCTTCACACACCCACGGTGTTCAGCCCTTAGGCAATCTCTATTTCAACCCAGGTTCCATCAACTCCAGAGACACTGGTTTAGGTAATCTTCATACCCTCACTGATGAACTTGTTCTTGATATTCTAGGGTTTTTAGATGGTAATAGTTTAGGGGTTTTGGCTTGTGTGAGTAAATCATTTTATGTTTTCACTAATCATGATCCCCTTTGGAGGAATCTTGTGTTGGAGAATTTTGTTGATGGGTTTCAGTATAATGGGTCATGGAAATCTACTTTTGTTGTTTCTAATGGGTACCCTTTGTTGGACATTGCCAGTGGCGATGTTCGGAGTTTTAAAGTTAGAGACTTTTATTCGGATTATCTTTTTCAGAGTTGGTTATGTGCTAATCTTGAAATGAAAGGTGAATGGTTGGAGAGGGATAATATTGTTAGGAAGAGAGGGATTTCTATTGAGGAGTTTGTGGCGAATTTTGAGGAGGTTAATAAGCCGGTATTGTTGGAAGGGTGTATTGATAATTGGGATGCATTCAGGAATTGGGATAGAGATTATTTGGTTAAGTTGTGTGGTGATGATGTTAAGTTTTCCCTTGGGCCGGTGGAGATGAAGCTTAAGGACTATTTTGGATATTCGGATCAAGTTAGAGAAGAAAGGCCGTTGTATTTGTTTGATCCGAAATTTGCTGAAAAAATTCCAAAATTGGGTTTGGAATATGAAGTTCCGATGTATTTTCGGGAGGATTTGTTTGGTGTTTTGGGAAATGAGAGACCCGACTACAGGTGGATTATTATTGGACCTGCTGGGTCTGGGTCGTCTTTTCATGTTGATCCGAATTCAACTTCAGCTTGGAATGCTGTGATCCAGGGGTCGAAGAAATGGGTACTGTTTCCTCCCGATATTATTCCGCCCGGTGTTCATCCTAGCCCTGATGGTGCAGAGGTTGCATCTCCTGTTTCAATAATTGAATGGTTCATGAACTTTTATGGCGCAACAAAGAATTGGAAAAAGAAGCCAATTGAGTGCATATGTAAAGCGGGGGAGGTTATCTTTGTGCCCAGTGGATGGTGGCATTTGGTGATCAACCTGGAGGAATCAATTGCCATAACACAAAACTATGTTAGCAGGAGAAATTTGTTAGGTGTCTTGGAGTTTCTTAAGAGGCCGAACGCAAGCACACTGGTATCTGGAACAAAGGATAGAGTAAATTTGCATGATAGGTTTAAGAATGCTATTGAGGCTTCTTTTCCTGGAGCAATTGATGAACTGACCCAAAAAGAAGAAGAGAAAAAGATCCAGCAAAGGAAACTTTCCTTCTGGGATTCTGTTGCAGACACCAGAGTGGGAGCTTTCAAGTTCTCCTTCTAG 1557 0.4021 MLSFRMMNLLSRIKTRTKKKIKTKNRNKNPHKLKIQNPISSITKNHQSLVEEEDTEECFDIKSSAPSHTHGVQPLGNLYFNPGSINSRDTGLGNLHTLTDELVLDILGFLDGNSLGVLACVSKSFYVFTNHDPLWRNLVLENFVDGFQYNGSWKSTFVVSNGYPLLDIASGDVRSFKVRDFYSDYLFQSWLCANLEMKGEWLERDNIVRKRGISIEEFVANFEEVNKPVLLEGCIDNWDAFRNWDRDYLVKLCGDDVKFSLGPVEMKLKDYFGYSDQVREERPLYLFDPKFAEKIPKLGLEYEVPMYFREDLFGVLGNERPDYRWIIIGPAGSGSSFHVDPNSTSAWNAVIQGSKKWVLFPPDIIPPGVHPSPDGAEVASPVSIIEWFMNFYGATKNWKKKPIECICKAGEVIFVPSGWWHLVINLEESIAITQNYVSRRNLLGVLEFLKRPNASTLVSGTKDRVNLHDRFKNAIEASFPGAIDELTQKEEEKKIQQRKLSFWDSVADTRVGAFKFSF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03626 518 Gene3D Cupin 188 438 - -
Mepo3g03626 518 Pfam Cupin-like domain 217 436 IPR041667 -
Mepo3g03626 518 FunFam F-box protein At1g78280 187 438 - -
Mepo3g03626 518 SUPERFAMILY Clavaminate synthase-like 211 450 - -
Mepo3g03626 518 Pfam F-box-like 100 140 IPR001810 GO:0005515
Mepo3g03626 518 ProSiteProfiles F-box domain profile. 92 138 IPR001810 GO:0005515
Mepo3g03626 518 SMART cupin_9 284 453 IPR003347 -
Mepo3g03626 518 ProSiteProfiles JmjC domain profile. 293 453 IPR003347 -
Mepo3g03626 518 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 92 515 - -
Mepo3g03626 518 SUPERFAMILY F-box domain 90 158 IPR036047 GO:0005515
Mepo3g03626 518 Gene3D - 88 163 - -
Mepo3g03626 518 SMART fbox_2 98 138 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03626 Mepo-Chr3 45991296 45994172 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03626 83 442 Glycosyltransferase AT1G78280 39.459 7.29e-79 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo3g03626 Cupin_8 1.1e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03626 - - gmx:100782241 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03626 3 45991296 45994172 Mepo3g03626 3 45991296 45994172 ECH