Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03615 ATGAGAGCCACAAACTTTCTTAGGATTTTGAACAAGCAGTTTCTCGGAATCGCCGGCGACACTGCAAATGCTGTCACTACCAAGCTGAAATCTCCCCCTCCTCCTGCTCCGGCGCGTAAACCGGCTTTTATAGATGCATTTCTATACAAGATGAAGAAGAATCCTGAACTTCTGAAGAACAAACAAATTTGGTCAAGAAGATCTACTATTTTGCCGGAATTTGTTGATTCTCATGTCAGGATTTACAATGGAAAAACCTTCATTCGTTGTAAAATCACTGAGGGAAAAGTGGGTCATAAGTTTGGTGAGTTTGCTTTAACTAGGAAACGTAAAGCTAAAGATCAACCTAATGCTAAAGTTAAGCAACTCAAGAAAAAGAAGTGA 384 0.3984 MRATNFLRILNKQFLGIAGDTANAVTTKLKSPPPPAPARKPAFIDAFLYKMKKNPELLKNKQIWSRRSTILPEFVDSHVRIYNGKTFIRCKITEGKVGHKFGEFALTRKRKAKDQPNAKVKQLKKKK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03615 127 Gene3D 30s Ribosomal Protein S19; Chain A 37 122 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mepo3g03615 127 Hamap 30S ribosomal protein S19 [rpsS]. 6 121 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo3g03615 127 SUPERFAMILY Ribosomal protein S19 39 111 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mepo3g03615 127 ProSitePatterns Ribosomal protein S19 signature. 83 107 IPR020934 GO:0003723
Mepo3g03615 127 PRINTS Ribosomal protein S19 family signature 63 82 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo3g03615 127 PRINTS Ribosomal protein S19 family signature 83 95 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo3g03615 127 PRINTS Ribosomal protein S19 family signature 95 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo3g03615 127 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 39 122 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo3g03615 127 Pfam Ribosomal protein S19 50 111 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo3g03615 127 FunFam Ribosomal protein S19, mitochondrial 35 122 - -
Mepo3g03615 127 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03615 Mepo-Chr3 45900828 45901643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03615 53 109 Cytoplasmic Ribosomal Protein Gene Family AT5G09490 35.088 1.13e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03615 K02965 - gmx:100782150 183.726