Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03614 ATGATTGTGCCCCTTCATTACTTACCCTTTCTATATTTTTCCTCAACGAAGGCCTCAAAGATGGAAACCAAGGCGGAAAATCATATGACATCAGCTGCAGCTTTTGTTGAAGGCGGCATTCAAGAGTCTTGTGATGATGCTTGCAGCATATGTCTTGAAGAGTTTTGTGAAAATGATCCTTCAACTGCCACTGCTTGTCGACACGAGTTTCACCTGCAATGCGTCCTAGAATGGGGTCAAAGAAGCTCCCAATGTCCTATGTGTTGGCAACCTATTAGCTTGAAAGATCCTACCGGTCAAGAATTGTTTAAGGTAGTAGAGCAAGAGAGAAAGTTGAGGGTTACTCCATCAAGGAATATTGATATCTTTCATCGCCCTACTCTTGGAGGTTTTGGATTTCAACATCTACAAATGGGTGTCAATGGTTCTACTTTAGAAGAGAGATTGCTTCAAAATTTAGCGATTGTTGCATCAATCGGAAGAACACACCATGTTGGTCGAAGGGAAGGACAACAAATTCGACCATCTGGTCATGGTCAACCACCCTTCTTATTCTCAAATCAGCATGTTGCACCTTCATCAATTTTAGGTTCAGTTGATGAAAGAGAAGACAGTCTAAATGTAATTCATATGAGTAGTCAATCTACTCCAATAACATCTAGTGAAGATGAACCATTACAACAAATGCCAAAACGTCAAACTGAAAGTTCCTCAACTCCTGGATCAACTGTTACGGAAACAAATGGCCAAGAAACTTACTCCAATGATAGAGATTGTGTTGCTAATTCTTCCCCAATAAACCAAAATAGAGAAAGGTCATCAGAATTCCATTCATTTTCAGATACTTTGCGGTCCAAACTCAATGCAGTGTCAATGAGATATAAAGAGTCAATTTCAAATGGTACAAGGGGTTGGAAGGAAAGGTTGTTCTCTCGAAGTTCGACCATGTCAGAATTTGGTTCAAATTCAAGAAAAAGGTGA 981 0.3986 MIVPLHYLPFLYFSSTKASKMETKAENHMTSAAAFVEGGIQESCDDACSICLEEFCENDPSTATACRHEFHLQCVLEWGQRSSQCPMCWQPISLKDPTGQELFKVVEQERKLRVTPSRNIDIFHRPTLGGFGFQHLQMGVNGSTLEERLLQNLAIVASIGRTHHVGRREGQQIRPSGHGQPPFLFSNQHVAPSSILGSVDEREDSLNVIHMSSQSTPITSSEDEPLQQMPKRQTESSSTPGSTVTETNGQETYSNDRDCVANSSPINQNRERSSEFHSFSDTLRSKLNAVSMRYKESISNGTRGWKERLFSRSSTMSEFGSNSRKR 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03614 326 MobiDBLite consensus disorder prediction 166 186 - -
Mepo3g03614 326 SMART ring_2 48 88 IPR001841 -
Mepo3g03614 326 MobiDBLite consensus disorder prediction 299 320 - -
Mepo3g03614 326 MobiDBLite consensus disorder prediction 213 278 - -
Mepo3g03614 326 Pfam Ring finger domain 47 88 IPR001841 -
Mepo3g03614 326 MobiDBLite consensus disorder prediction 213 273 - -
Mepo3g03614 326 MobiDBLite consensus disorder prediction 299 326 - -
Mepo3g03614 326 SUPERFAMILY RING/U-box 40 96 - -
Mepo3g03614 326 ProSiteProfiles Zinc finger RING-type profile. 48 88 IPR001841 -
Mepo3g03614 326 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 25 97 - -
Mepo3g03614 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 97 IPR013083 -
Mepo3g03614 326 FunFam E3 ubiquitin-protein ligase RHF2A isoform X1 26 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03614 Mepo-Chr3 45896011 45899244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03614 45 96 C3H Transcription Factor Family AT4G00335 44.231 3.27e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03614 K19043 - gmx:100800419 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03614 3 45896011 45899244 Mepo3g03614 3 45896011 45899244 ECH