Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03609 ATGGGAAACAATTGTGTTGGACCTAGAAGAACCTATGAACATGAAAGTTTTCCAACTTCATTTTGGTGGCCATGGTCATTGTCATGGTCCTATCCAATCAACCAAACACAAATTTCAGTTTCACAAAACACAAATTCTTCACAAACCGATCAACAAAACCCTCCACATGTTCACAAAATTGAGAACAAAGACATGAAGCCACTTCAGTCTAATACTGCTTCAGACAAGGAAGATGCAGAACCAGTTACGCAGTTGAAGGAAAAAGCTACACCAACAAAATCTGCTGCAAAACCAATGATGTCGAAAAATATTAATATTAGGAGGGTAACACCAAAAAGTGCAGGTCTTCGAGCAGAATCGGTTTTGTTGACAAACAATGGTCCTTTTAGGGAATTTTATAAGTTAGGAGATGAACTTGGGAAAGGAAAGTTTGGAACTACTTCACTTTGTTTGGAGAAATCAACAGGGAAGACATACGCATGCAAAGCAATCCCAAAGGTAAAATTGTTTAGAGAGAATGATATAGAGGATGTGAGGAGGGAGATTGAAATAATGCATCACTTGGTTGGGATTCCGAGTGTGATATCAATAAAAGGAGCTTATGAAGATCCGGTAGTTGTTTATATTGTCATGGAATTATGCGAAGGAGGTGAGTTGTTCGATAGGATTGTGGAAAGGAGACATTACTCCGAGAGAAAGGCTGCTAAACTTGCAAGAACGATTGTTAATGTTGTTGAGGCTTGTCACTCATGTGGAGTTATGCATCGTGATCTTAAGCCTGAAAATTTCCTTTTTGTTGATGGAGATGAAGATTCCACTCTTAAGGCAATTGATTTTGGACTGTCCGTTTTCTTCAAACCAGGGGAAAAATTTAGTGATTTTGTCGGAAGTGCTTATTATGTTGCACCAGAGGTTATAGAAGAGTGTTATGGGCCAGAAGCTGATGTGTGGAGTGCAGGTGTGATCATATACATTCTCTTATGTGGAACACCTCCCTTTTATGGTGAATTGGATCAAGAGATATTTGATGAGGTTTTACATGGTGAAATTGATTTCTCTTCGGATCCTTGGCCAAGTATTTCTGAAAGTGCCAAAGACTTGGTTAAGAAGATGCTTGATAGAGATCCTAAAACACGAATCACAGCACATGAAGTTCTAAGTCACCCTTGGATTCAGGTTGATAGAGTTGCTCCAGACATGTCTCTTGATTCCGCGACTTTGAGTCGTCTAAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCAAAAAATCTTTCTGAAGATGAAATTTCTGGGTTGAAAGAATCGTTTAAGATGATAGATACAGACAACACTGGTCAAATTACCTTTGAAAAACTCAAGGTTGGACTGAAAAAGTTTGGTGCCAATCTCTCTGAATCCGAAATTTTTGATCTAATGCAAGCTGCAGATATTGATAACAATGGCATGATTGACTATGGAGAATTCATAGCTGCAACGTTGCATTTAAACAAAGTTAACAAGGAAGATCATTTAGTTGCAGCTTTCTCTTATTTTGATAAAGATGGAAATGGCTACATCACTCAAGACGAGCTTCAACAAGTTTGTAAAGAGTTTGGCATGAAGGATGTCCACTTTAAGGAAATGATCGGAGAAGCTGATCAAAATAATGATGGACAAATTGACTACAATGAATTTGTGGCTATGATGCAGAGAAGCAATGCAGATTTAGAAAATAATGGTGTAAAGTGTAGCACTAACTTTAACGTTGGATTAGGGAAGACAAAGACACTGTCAATATGTTAG 1803 0.3799 MGNNCVGPRRTYEHESFPTSFWWPWSLSWSYPINQTQISVSQNTNSSQTDQQNPPHVHKIENKDMKPLQSNTASDKEDAEPVTQLKEKATPTKSAAKPMMSKNINIRRVTPKSAGLRAESVLLTNNGPFREFYKLGDELGKGKFGTTSLCLEKSTGKTYACKAIPKVKLFRENDIEDVRREIEIMHHLVGIPSVISIKGAYEDPVVVYIVMELCEGGELFDRIVERRHYSERKAAKLARTIVNVVEACHSCGVMHRDLKPENFLFVDGDEDSTLKAIDFGLSVFFKPGEKFSDFVGSAYYVAPEVIEECYGPEADVWSAGVIIYILLCGTPPFYGELDQEIFDEVLHGEIDFSSDPWPSISESAKDLVKKMLDRDPKTRITAHEVLSHPWIQVDRVAPDMSLDSATLSRLKQFSAMNKLKKMALRVIAKNLSEDEISGLKESFKMIDTDNTGQITFEKLKVGLKKFGANLSESEIFDLMQAADIDNNGMIDYGEFIAATLHLNKVNKEDHLVAAFSYFDKDGNGYITQDELQQVCKEFGMKDVHFKEMIGEADQNNDGQIDYNEFVAMMQRSNADLENNGVKCSTNFNVGLGKTKTLSIC 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03609 600 Gene3D - 402 576 - -
Mepo3g03609 600 ProSitePatterns EF-hand calcium-binding domain. 553 565 IPR018247 -
Mepo3g03609 600 ProSitePatterns EF-hand calcium-binding domain. 519 531 IPR018247 -
Mepo3g03609 600 FunFam Calcium-dependent protein kinase 1 399 573 - -
Mepo3g03609 600 CDD STKc_CAMK 132 390 - -
Mepo3g03609 600 CDD EFh 439 498 IPR002048 GO:0005509
Mepo3g03609 600 ProSiteProfiles EF-hand calcium-binding domain profile. 470 505 IPR002048 GO:0005509
Mepo3g03609 600 ProSiteProfiles Protein kinase domain profile. 133 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03609 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Mepo3g03609 600 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Mepo3g03609 600 Pfam EF-hand domain pair 510 570 IPR002048 GO:0005509
Mepo3g03609 600 SMART serkin_6 133 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03609 600 ProSitePatterns EF-hand calcium-binding domain. 483 495 IPR018247 -
Mepo3g03609 600 CDD EFh 510 570 IPR002048 GO:0005509
Mepo3g03609 600 ProSiteProfiles EF-hand calcium-binding domain profile. 544 575 IPR002048 GO:0005509
Mepo3g03609 600 Pfam Protein kinase domain 133 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03609 600 Pfam EF-hand domain pair 451 501 IPR002048 GO:0005509
Mepo3g03609 600 FunFam Calcium-dependent protein kinase SK5 219 403 - -
Mepo3g03609 600 Gene3D Transferase(Phosphotransferase) domain 1 219 401 - -
Mepo3g03609 600 ProSiteProfiles EF-hand calcium-binding domain profile. 506 541 IPR002048 GO:0005509
Mepo3g03609 600 FunFam Calcium-dependent protein kinase 1 135 218 - -
Mepo3g03609 600 MobiDBLite consensus disorder prediction 40 55 - -
Mepo3g03609 600 SUPERFAMILY Protein kinase-like (PK-like) 131 392 IPR011009 -
Mepo3g03609 600 SMART efh_1 544 572 IPR002048 GO:0005509
Mepo3g03609 600 SMART efh_1 510 538 IPR002048 GO:0005509
Mepo3g03609 600 SMART efh_1 474 502 IPR002048 GO:0005509
Mepo3g03609 600 SMART efh_1 438 466 IPR002048 GO:0005509
Mepo3g03609 600 SUPERFAMILY EF-hand 430 574 IPR011992 -
Mepo3g03609 600 Gene3D Phosphorylase Kinase; domain 1 135 218 - -
Mepo3g03609 600 MobiDBLite consensus disorder prediction 56 84 - -
Mepo3g03609 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 123 565 - -
Mepo3g03609 600 MobiDBLite consensus disorder prediction 40 96 - -
Mepo3g03609 600 ProSiteProfiles EF-hand calcium-binding domain profile. 434 469 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03609 Mepo-Chr3 45860612 45864142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03609 1 600 EF-hand Containing Proteins AT5G04870 60.289 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo3g03609 Pkinase 1.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03609 K13412 - gmx:100814475 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03609 3 45860612 45864142 Mepo4g01698 4 22279170 22284573 PCT
Mepo4g02211 4 29875556 29879325 Mepo3g03609 3 45860612 45864142 PCT