Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03589 ATGGCAACGTACTACCATGGTGGTAATTCAGAAATCCAATCAAGTGGTGGCGGCGGCGCCGACGGACTTCAAACACTAGTTCTAATGAATCCAAGCTATATACAATATTCTGATACTACACAGCAACAACAAGCTCAACCACCTTCTCACGCGGCCGGTAACTATGTTTTCCTTAACTCCACAGCCGCTGAAAACAACTCTTTCTCACCTCACGCGCCACCTTCCAACACTCAACAATTCGTTGGCATACCTCTCAGCCACCAACAACACCAAATCCACGCGCACCATGACGTTGTACCTTCTTTGCATGGCTTCCTTCCACACATGCAGTACAATCAATGGAACACAATTAACCCAAACACGGCGGCGCGTGATACACCACGCGCTCAACAAGGACTGTCTCTTAGTCTCTCTTCGCAGCCCACAAGGTTCGTTTCTATGTCTGGTGGTTCGCCGTCTCCGGCTTCTGGTGTTACAACCAACAATAACAATGGGAATCCGGGGATTCAGATTCTGAGTTCAAAATATTTAAGGGCAGCACATGAGCTTTTAGAAGAGGTTGTGAATGTGAATAGTGGTGTTGAATTGGGAAAGAAGAGTAGTGGTGGAATGAGCAAGGTGAATATTGGAGAATCATCAGGAGTTGGTAGTGGAGGAGATGGATCAATCATTGGTGGTGGGGAGGGAAGTGGGAAGCGTAGCTCTGAGCTATCAACAGCTGAAAGACAAGAAATACAGATGAAGAAAGCTAAGCTAATTACCATGCTTGATGAGGTGGAGCAAAGGTACAGACAGTACCACCATCAAATGGAGGTTGTGGTTTCATCGTTCGAACAAGCTGCCGGAATCGGCTCAGCTAGGACATACACTGCCCTTGCCCTGCAAACAATCTCAAAGCAGTTTCGGTGTTTGAAAGATGCAATAACAGGACAAATAAAAGCTACAAATAAGAGTTTGGGTGAAGAGGATTGCTTTGGAGGTAAAATTGAAGGTTCAAGGCTCAAATATGTTGATCATCAACTACGTCAACAACGTGCTCTACAACAATTGGGAATGATCCAGCATAATGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTCCGTGCTTGGCTTTTTGAACATTTCCTCCACCCTTATCCAAAGGATTCAGACAAGCACATGCTTGCAAAACAAACAGGGCTTACTAGGAGTCAGGTTTCTAATTGGTTTATAAATGCTAGAGTTAGGCTTTGGAAGCCAATGGTGGAAGAAATGTACGTAGAAGAAATGAAGGAAAATGAACTAAATGGATCTGAGGATAAACAAAGCAAGAGCAATGAAGATTCTTCAATGAAAATAACATCCTCTCAAGAAAAAGCTCTCACCTCTGAAACAGAACCTAAAGGTTACAACTCCACACAAGACATTTCCAAAAGCCAAGACACTCCAATAATTTCTGTTTCTAGACCACAAACATCACCACTTGTTGGAAATGTTAGAAACAATTCAGGATTTAGCTTCATTGGATCATCAGAACTAGAAGGGATACCACAAGGAAGTCCTAAAAAACCAAGGAACCATGAACTTATGCATAACCCTAATAGTTTCATTGATGTGAAGCACAATGAGGCAAATAATGAGGAACTACCAATGAAATTTGGTGATGAGAGACAAAATAGAGATGGTTACTCTTTTATGGGAAACCAAACAAATTTCATTGGTGGATTTGGACAATACCCAATTGGTGATATTGGTAGGTTTGACTCAGAACAATTCGCACCAAGGTTTTCAAGTAATAATGTTTCACTCACTCTTGGTCTTGATTCAATACAAGGAAATCATCAAACATTTCTACCAAACCAAAACATTCAACTAGGAAGAAGCATTGATATAAGTGAACCAAATGAGTTTGGTTCTATAAACACTTCCTCTCCTCAATATGAAAGTATCAACATGCAAAACCCAAAAAGGTTTGCTGCACAGTTGCTACCAGATTTTGTGTCCTAA 2001 0.4183 MATYYHGGNSEIQSSGGGGADGLQTLVLMNPSYIQYSDTTQQQQAQPPSHAAGNYVFLNSTAAENNSFSPHAPPSNTQQFVGIPLSHQQHQIHAHHDVVPSLHGFLPHMQYNQWNTINPNTAARDTPRAQQGLSLSLSSQPTRFVSMSGGSPSPASGVTTNNNNGNPGIQILSSKYLRAAHELLEEVVNVNSGVELGKKSSGGMSKVNIGESSGVGSGGDGSIIGGGEGSGKRSSELSTAERQEIQMKKAKLITMLDEVEQRYRQYHHQMEVVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKATNKSLGEEDCFGGKIEGSRLKYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYVEEMKENELNGSEDKQSKSNEDSSMKITSSQEKALTSETEPKGYNSTQDISKSQDTPIISVSRPQTSPLVGNVRNNSGFSFIGSSELEGIPQGSPKKPRNHELMHNPNSFIDVKHNEANNEELPMKFGDERQNRDGYSFMGNQTNFIGGFGQYPIGDIGRFDSEQFAPRFSSNNVSLTLGLDSIQGNHQTFLPNQNIQLGRSIDISEPNEFGSINTSSPQYESINMQNPKRFAAQLLPDFVS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03589 666 CDD homeodomain 358 419 IPR001356 GO:0003677
Mepo3g03589 666 MobiDBLite consensus disorder prediction 446 496 - -
Mepo3g03589 666 SUPERFAMILY Homeodomain-like 359 425 IPR009057 -
Mepo3g03589 666 Coils Coil 242 262 - -
Mepo3g03589 666 MobiDBLite consensus disorder prediction 142 164 - -
Mepo3g03589 666 MobiDBLite consensus disorder prediction 430 445 - -
Mepo3g03589 666 Pfam Associated with HOX 171 309 IPR006563 -
Mepo3g03589 666 Gene3D - 354 432 - -
Mepo3g03589 666 Pfam Homeobox KN domain 375 414 IPR008422 GO:0003677|GO:0006355
Mepo3g03589 666 MobiDBLite consensus disorder prediction 430 496 - -
Mepo3g03589 666 FunFam BEL1-like homeodomain protein 9 361 423 - -
Mepo3g03589 666 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 71 444 - -
Mepo3g03589 666 SMART prehox3 166 310 IPR006563 -
Mepo3g03589 666 MobiDBLite consensus disorder prediction 211 237 - -
Mepo3g03589 666 ProSiteProfiles 'Homeobox' domain profile. 355 418 IPR001356 GO:0003677
Mepo3g03589 666 SMART HOX_1 358 422 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03589 Mepo-Chr3 45649163 45655154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03589 1 666 Homeobox Transcription Factor Family AT2G35940 48.529 6.17e-170 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo3g03589 POX 4.7e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03589 - - gmx:100810901 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03589 3 45649163 45655154 Mepo3g03589 3 45649163 45655154 ECH