Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03581 ATGAACCACATAACACTCCTTCTCTTTCTCTTCCTCCTCTCACCTTCCTTAGTCCTCACAACAACCAACCCAGACGACCTTAAAATCCTCAACGACTTCAAAGACAACCTAGACAACCCAGACATCCTACAATGGCCCAAAAACAACAACGACCCATGTGGTCCACCTGCTTGGAAATTCATCTTCTGCGACGGTGATAGAGTTTCACAGATTCAAGCCAAAAACTTGAACCTTTCTGGAACTTTACCTCAAAATCTCAACCAACTAACCCATCTCTTCAACTTGGGTCTTCAAAACAACAAACTTAAAGGACCTTTACCGTCGCTAAATGGTTTATCAAATCTCAAATACGCTTTTCTTGATAACAATCAATTCGATTCCATTCCTATGGATTTCTTTCAAGGGTTAACCAGTTTAGACACTCTTGCATTAGATAACAATAATCTCAATGCTTCTAACAATGGTTGGAATTTTCCTTCTTCTTTGCAGGATTCTACTCAGTTAAGAGATTTATCTTGTATCACTTGTAATTTGGTTGGCCCTTTACCTGGTTTTCTTGGAAAAATGAATTCTTTGTCAAATTTGAAGCTTTCTGGTAACAGTTTAACCGGTGAGATTCCGAAGACTCTTAACAATTCGGGGTTGCAAATGCTGTGGTTGAATAACCAGAAGGGTGAGTTGTTATCTGGAAGTATTGATATTGTTGCTACTATGGTTTCTCTTACTAGTTTATGGCTTCATGGTAACCGGTTCACTGGTTCCATTCCGGAGAATATTGGTGACTTGGTTTCACTTAAAGATCTTAATCTTAATGGAAATGAGCTTGTTGGACTTGTTCCTAGTTCTTTAGCTGATATGGAATTGGATAAGCTTGATTTGAATAATAACCGGTTTATGGGTCCTATTCCCAAGTTTAAAGCTTCTAAGGTTTCTTATAGTAACAATGATTTTTGTTTAAATGAAACTGGTGTTCCTTGTTCTTTTGAAGTTATGTCTCTTTTAGGGTTTCTTGGTGGGTTGAATTATCCTTCAAATTTGGTTGATTCATGGAGTGGGAATAATCCTTGTGTAACTTGGTTGGGGATTATATGCAATGCTGATGGTAAAGTCTCTATGATTAATATGCAACGTTTTAATCTTAGTGGTACTTTAAGTCCTTCTGTTGCAAATTTAGGTTCTTTAGTTTCAATTAAATTGGGAGGTAATCATCTCAATGGTGTTGTACCTAGTAACTGGACTAGCTTGAGGAATCTGAATGTGTTGGATCTGAGTGACAATAATATTTCACCTCCTTTGCCGGTTTTTAGTAATGGATTGAAACCTATGGTTGATGGGAATTCTCTGTTGAATGGTGGGACCGAAGGTCCTTCCGCGGGGAAAAACAGTCCATCAGGTGGATCTGGGAATACTGGTGACGATACGAAGGGAGGCTCAAATTCAAGTCCAAGTGATTCGGTTGAAACAAAAAAATCAAAAAAGAAAAGCTTGGTTTTGATTGTAGCACCTATTGCTGGTGTGGCGGTTGCTGCTTTTCTGTTGATACCGCTTTATGCGTATTGTTTCAGGAGGACAAAGGATGGTTTCCAGGCACCAAGTTCACTCGTAGTTCACCCTAGAGATCCGTCTGATACGGACAGTACCGTAAAGATAGCTATTGCTAATAATACCAATGGAACAGGGAGTGGGACTGGGAGTAGAAACAGCAGTGCAATTGGGGACTCTCATACCATTGAAGCCGGAAATCTTGTGATATCAGTTCAAGTTCTAAGAAACGTGACCAAGAATTTCGCCCCTGAGAATGAGCTCGGCCGCGGTGGGTTTGGAGTTGTTTATAAGGGAGAGTTGGATGATGGAACTAAGATTGCCGTAAAAAGAATGGAAGCAGGTGTGATAACCAATAAAGCTTTGGATGAGTTTCAGGCTGAAATTGCAGTTCTGTCAAAAGTTCGACATCGGCATCTGGTGGGCCTTATAGGTTATTCTATTGAAGGTAATGAGAGGATTCTAGTGTATGAGTATATGCCACAAGGTGCTCTCAGTCAGCATCTTTTTCATTGGAAGAGCTATGGACTCGAGCCTCTCTCTTGGAAGAGGAGGCTTAATATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATACTCTAGCTCATCAGAGCTTCATTCATAGAGATCTTAAGTCCTCAAACATTTTGCTTGCCGATGATTTTAGAGCTAAAGTCTCAGATTTTGGATTGGTAAAACTTGCTCCTAATGGTGAAAAATCTGTAGTGACCAAGCTTGCTGGAACCTTTGGATACTTGGCTCCAGAATATGCAGTGACAGGAAAAATCACTACCAAAGTAGATGTTTTCAGTTTTGGGGTTGTGCTAATGGAGCTGTTGTCTGGATTGATGGCACTTGATGAGAGCAGACCTGAGGAAAGCCAATACTTGGCAGCATGGTTCTGGAATATAAAATCAGACAAGAAGAAACTAATGGCTGCTATTGACCCAACCCTCGACATAAACGAAGAAACATTCGAAAGTGTCTCAATTATTGCTGAGCTAGCTGGACACTGCACGGCCAGAGAACCAAACCAAAGGCCAGAAATGGGTCATGCTGTCAATGTTCTCGCACCACTCGTTGAAAAATGGAAACCGTTTGACGATGACCCCGATGAGTATTCCGGCATCGATTATAGTCTTCCCCTTACCCAAATGGTCAAGGGATGGCAAGAGGCGGAGGGAAAGGACACAAGTTATATGGATCTAGAAGACAGTAAGAGCAGTATCCCTGCAAGACCTACTGGATTTGCAGATTCTTTTACTTCGGCTGATGGCCGGTGA 2829 0.4107 MNHITLLLFLFLLSPSLVLTTTNPDDLKILNDFKDNLDNPDILQWPKNNNDPCGPPAWKFIFCDGDRVSQIQAKNLNLSGTLPQNLNQLTHLFNLGLQNNKLKGPLPSLNGLSNLKYAFLDNNQFDSIPMDFFQGLTSLDTLALDNNNLNASNNGWNFPSSLQDSTQLRDLSCITCNLVGPLPGFLGKMNSLSNLKLSGNSLTGEIPKTLNNSGLQMLWLNNQKGELLSGSIDIVATMVSLTSLWLHGNRFTGSIPENIGDLVSLKDLNLNGNELVGLVPSSLADMELDKLDLNNNRFMGPIPKFKASKVSYSNNDFCLNETGVPCSFEVMSLLGFLGGLNYPSNLVDSWSGNNPCVTWLGIICNADGKVSMINMQRFNLSGTLSPSVANLGSLVSIKLGGNHLNGVVPSNWTSLRNLNVLDLSDNNISPPLPVFSNGLKPMVDGNSLLNGGTEGPSAGKNSPSGGSGNTGDDTKGGSNSSPSDSVETKKSKKKSLVLIVAPIAGVAVAAFLLIPLYAYCFRRTKDGFQAPSSLVVHPRDPSDTDSTVKIAIANNTNGTGSGTGSRNSSAIGDSHTIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVITNKALDEFQAEIAVLSKVRHRHLVGLIGYSIEGNERILVYEYMPQGALSQHLFHWKSYGLEPLSWKRRLNIALDVARGMEYLHTLAHQSFIHRDLKSSNILLADDFRAKVSDFGLVKLAPNGEKSVVTKLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLSGLMALDESRPEESQYLAAWFWNIKSDKKKLMAAIDPTLDINEETFESVSIIAELAGHCTAREPNQRPEMGHAVNVLAPLVEKWKPFDDDPDEYSGIDYSLPLTQMVKGWQEAEGKDTSYMDLEDSKSSIPARPTGFADSFTSADGR 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03581 942 MobiDBLite consensus disorder prediction 446 488 - -
Mepo3g03581 942 FunFam Receptor-like kinase TMK4 24 323 - -
Mepo3g03581 942 Gene3D Phosphorylase Kinase; domain 1 560 673 - -
Mepo3g03581 942 SUPERFAMILY L domain-like 333 437 - -
Mepo3g03581 942 Gene3D Ribonuclease Inhibitor 24 324 IPR032675 -
Mepo3g03581 942 FunFam receptor protein kinase TMK1 674 891 - -
Mepo3g03581 942 MobiDBLite consensus disorder prediction 910 942 - -
Mepo3g03581 942 SUPERFAMILY L domain-like 22 305 - -
Mepo3g03581 942 SUPERFAMILY Protein kinase-like (PK-like) 574 872 IPR011009 -
Mepo3g03581 942 PANTHER OSJNBA0070M12.3 PROTEIN 7 942 - -
Mepo3g03581 942 SMART serkin_6 596 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03581 942 MobiDBLite consensus disorder prediction 450 485 - -
Mepo3g03581 942 ProSiteProfiles Protein kinase domain profile. 596 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03581 942 Pfam Protein kinase domain 599 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03581 942 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Mepo3g03581 942 Pfam Leucine rich repeat N-terminal domain 332 365 IPR013210 -
Mepo3g03581 942 FunFam Leucine-rich repeat receptor-like kinase 328 451 - -
Mepo3g03581 942 CDD STKc_IRAK 602 875 - -
Mepo3g03581 942 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Mepo3g03581 942 Pfam Leucine rich repeat 240 298 IPR001611 GO:0005515
Mepo3g03581 942 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Mepo3g03581 942 Gene3D Transferase(Phosphotransferase) domain 1 674 888 - -
Mepo3g03581 942 SMART LRR_typ_2 189 213 IPR003591 -
Mepo3g03581 942 SMART LRR_typ_2 112 135 IPR003591 -
Mepo3g03581 942 SMART LRR_typ_2 391 414 IPR003591 -
Mepo3g03581 942 SMART LRR_typ_2 262 285 IPR003591 -
Mepo3g03581 942 SMART LRR_typ_2 238 261 IPR003591 -
Mepo3g03581 942 SMART LRR_typ_2 136 159 IPR003591 -
Mepo3g03581 942 SMART LRR_typ_2 415 437 IPR003591 -
Mepo3g03581 942 FunFam receptor protein kinase TMK1 558 673 - -
Mepo3g03581 942 Gene3D Ribonuclease Inhibitor 329 450 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03581 Mepo-Chr3 45561472 45565414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03581 78 909 Receptor kinase-like Gene Family AT1G55610 30.915 2.31e-86 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mepo3g03581 Pkinase 9.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03581 - - gmx:100305366 1409.43