Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03570 ATGGCCAATATGCAACCTCAATTGAACGACGCTAACTACTGGTCTACCATTCCATTGGCACCAGGACAATCCAGCAGCTACAACCAAAGCAACCATAAAAGTTGTTGTAGTTATCTCTGTAACATCTTTTGGAAGTTTCTGCTTGCACTCATTGTCCTCTTTGGTCTCATAATCCTTATCTTCTATCTCATTGTTCAACCCCGTGTCTTCAAGTTCTATGTTACGAAAGCCGAACTAACACAATTTGACTACACAAACAACACACTACACTACAACATGGTGCTCAATTTCACAGCACACAACCCAAACAAAAAACTCAGAATCTATTACGATAAAGTTGAAGCTCGAGCTTTCTATGAAGGATCGAGATTTGCAAATGTTGATGTGATCACACACATGAACTCGTTTCGCCAAAACAAGAAAACTAGTGACCCCATGAGTGGCGTTTTCTTAGGACAAAAATTGTTGGTACTCGACAATGATCAAGTCTCTGAATTCAACAAAGACAAGAGTGTTGGAGTTTATGATATCTATGTGAAACTCTACTTTAGGATTAGATTCAAACTTGGAGACTCGATATCTCGCACATACAAACCCAAGGTCAAATGTGACCTCAAAGTTCCGTTGAAATCTAGCAATAATGCAACCTTTACCTTCACTCGGGTTTTGCACAACAAATGCAATGTTGTGTTTTAG 696 0.3922 MANMQPQLNDANYWSTIPLAPGQSSSYNQSNHKSCCSYLCNIFWKFLLALIVLFGLIILIFYLIVQPRVFKFYVTKAELTQFDYTNNTLHYNMVLNFTAHNPNKKLRIYYDKVEARAFYEGSRFANVDVITHMNSFRQNKKTSDPMSGVFLGQKLLVLDNDQVSEFNKDKSVGVYDIYVKLYFRIRFKLGDSISRTYKPKVKCDLKVPLKSSNNATFTFTRVLHNKCNVVF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03570 231 PANTHER OS05G0367900 PROTEIN 42 214 IPR044839 GO:0098542
Mepo3g03570 231 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03570 Mepo-Chr3 45481252 45481978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03570 64 223 SNARE and Associated Proteins AT1G32270 33.951 3.30e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03570 - - tpra:123889192 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03570 3 45481252 45481978 Mepo3g03570 3 45481252 45481978 ECH
Mepo3g03570 3 45481252 45481978 Mepo4g02285 4 30762692 30763384 PCT