Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03558 ATGGGGAAGAAAAAAACATTGAACCAGCTCTCTTCTCTTCTCAAAAACACAGAACTCAAATATTCATCTTCTTCATCATGGCCATGGCCATATTGTCACCAACCAAAAACACTCTCTTTTAGAGCTGATAACATCAACAAAGATGACACTTTCAAAACCATTAACTCAGTTTACTTGGATGCTTCTGAATCTTTCTCCACTGTTTCTCCAGACTGTGATTCTAGCTTTTCAAAAGCTTCTAATGATCAAGAATCCGAACAAGTCGATTCGATTGAAACTGTGATTCGTGGATTATCTTCTGATCGGTTTTTCTTTGAGCCAGATGAGACCAACTCCATCTTAGAGGTTAATAATAAAACTGCTGCAATAGGAGGTGGTGAAACTCAAAGCTTACCATTCAAAGACAGTGTAGTTTTATCTATGGAATCTCGAGATCCTTATGTCGATTTTCGAAAGTCTATGGAGGAAATAGTAGAAGCTCATGATGTTAAAGATTGGAAAGGTCTACAAGAGCTTTTGAGTTGGTATTTGAAGGTCAATGAGAAAATCAATCATGGCTATATTGTTGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTGCTTCGACTTCTTCGTCATTTTCTACTTCATCTTCTTCTTCTTCTCGTTCTCCTTCTTCTCCTTTATCGTTTTATAGTTCTTCTTTGTCTTCCTCTTATAGCACTCGTTGTGTTTCTTGTTCGGAAGCTCGCGAGGAAGAGGTTGATACTCCTAGTTCTTCTTTGTTGTTAGAACAAGTTAGGGAGGAGATTGATTGCGAAGATGAAGATGAAGCTGATGCTTCACAAACTGAAGTTTCAACTTCATCTTCGTCTTCAAGTACTTAA 870 0.3759 MGKKKTLNQLSSLLKNTELKYSSSSSWPWPYCHQPKTLSFRADNINKDDTFKTINSVYLDASESFSTVSPDCDSSFSKASNDQESEQVDSIETVIRGLSSDRFFFEPDETNSILEVNNKTAAIGGGETQSLPFKDSVVLSMESRDPYVDFRKSMEEIVEAHDVKDWKGLQELLSWYLKVNEKINHGYIVGAFVDLLVGLAFASTSSSFSTSSSSSSRSPSSPLSFYSSSLSSSYSTRCVSCSEAREEEVDTPSSSLLLEQVREEIDCEDEDEADASQTEVSTSSSSSST 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03558 289 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 66 199 IPR038933 GO:0045892
Mepo3g03558 289 MobiDBLite consensus disorder prediction 266 289 - -
Mepo3g03558 289 ProSiteProfiles OVATE domain profile. 139 198 IPR006458 -
Mepo3g03558 289 NCBIfam uncharacterized plant-specific domain TIGR01568 137 200 IPR006458 -
Mepo3g03558 289 Pfam Transcriptional repressor, ovate 143 199 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03558 Mepo-Chr3 45377588 45378590 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mepo3g03558 Ovate 7.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03558 - - psat:127125591 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03558 3 45377588 45378590 Mepo4g04781 4 57243100 57244007 ECH
Mepo3g03558 3 45377588 45378590 Mepo3g03558 3 45377588 45378590 ECH
Mepo3g03558 3 45377588 45378590 Mepo4g02318 4 31196447 31197162 PCT