Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03536 ATGTGGGCAAGCGCAGAAGGTGGTGCTCCGGAGGTTACTCTAGAAACTTCCATGGGTTCATTCACCGTCGAGTTGTACTACAAGCATGCACCTAGAACTTGTAGGAACTTCATTGAACTATCTCGCAGAGGTTATTACGACAACGTTAAGTTCCACAGAATCATCAAGGATTTCATAATACAAGGTGGGGATCCTACTGGGACTGGAAGAGGAGGAGAATCCATTTATGGTGCTAAATTTGAAGATGAGATTAAACAAGAGTTGAAGCACACTGGAGCTGGTATTTTATCAATGGCTAATGCTGGCCCTAATACTAATGGTAGTCAGTTCTTTATTACTCTCGCACCGTGCCCCTCTCTTGATGGAAAACACACAATATTCGGAAGAGTAAGTCGGGGAATGGAAATCATCAAAAGACTTGGCAGTGTCCAAACAGATAACAATGACAGCCTTGCTGGGTTGGCTTTTATGTTTTCTTCCAGCATTTTGCTACAGATTCTGGCATGTGCAATATACAACAATTGGTGGCCCATGTTATCAGCTCTGATGTATGTACTGGTACCTATGCCTTGCTTATTCTTTGGAGGTGGGTCCACTCAATTTCTAATCAGTCGTGATGGTGGGGGTTGGATGGATGCTGCAAAGTTTTTGACGGGAGCATCATCTATGGGGAGCATAGCCATTCCTATAATCCTTAGGCATGCACACATGATTGAGACTGGAGCAATGCTCATTGAGCTTGTATCGTTCTTCATATTTATATGTACTGTTATGTGTTTCCACCAAGCGAGCCTTGACGATGATTGGTAA 810 0.4333 MWASAEGGAPEVTLETSMGSFTVELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIIQGGDPTGTGRGGESIYGAKFEDEIKQELKHTGAGILSMANAGPNTNGSQFFITLAPCPSLDGKHTIFGRVSRGMEIIKRLGSVQTDNNDSLAGLAFMFSSSILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWMDAAKFLTGASSMGSIAIPIILRHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03536 269 Gene3D - 2 162 IPR029000 -
Mepo3g03536 269 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 15 171 IPR002130 GO:0000413|GO:0003755
Mepo3g03536 269 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 46 63 IPR020892 GO:0003755|GO:0006457
Mepo3g03536 269 Pfam Vacuolar protein sorting 55 152 263 IPR007262 -
Mepo3g03536 269 SUPERFAMILY Cyclophilin-like 11 152 IPR029000 -
Mepo3g03536 269 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 9 150 IPR044666 -
Mepo3g03536 269 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 147 IPR002130 GO:0000413|GO:0003755
Mepo3g03536 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Mepo3g03536 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Mepo3g03536 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Mepo3g03536 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Mepo3g03536 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 IPR002130 GO:0000413|GO:0003755
Mepo3g03536 269 FunFam Peptidyl-prolyl cis-trans isomerase 2 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03536 Mepo-Chr3 45174208 45181462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03536 12 149 U-box Gene Family AT5G67530 50.725 1.25e-42 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03536 K12733 - gmx:100786302 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03536 3 45174208 45181462 Mepo3g03536 3 45174208 45181462 ECH