Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03535 ATGGACAATATGCCACCAGGTTATCGTTTCTACCCTACAGAAGAAGAGCTTATTTCGTTCTATCTTCACAAAATGCTTGAAGGAGAGAAAGAATACACGATTCGTACCGTTATACCAGTCGTTAATATATACGATTACAATCCATCACAACTCCCACAAATTTCAGGAGAGGCTAGTATGAGAGACACGGAACAATGGTTCTTTTTCATTCCAAGGCAAGAAAGTGAAGTGAGAGGAGGAAGACCAAAGCGTCTCACCAACACTGGGTACTGGAAAGCCACTGGATCTCCTAATCATGTTTATTCTTCAGATAATCGCATCATTGGAGTGAAAAGGACTATGGTTTTCTATAGTGGAAGAGCTCCAAATGGAAAGAAAACTGATTGGAAAATGAACGAGTATAAGGCCATTCAAATAGATGAAGCATCTTCTTCAAACAAAGTAGCTCCTAAGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAGAAATCAAAGTGCTTAAGGGCATTTGATAGACGACCACCACCAAGGAGGGTTACAACACATGTTCAAAATGCTCAAGAGCACCAGAAAGATTCAACTTGCGAACATGATGTTCAAATCTCGATGGACATAAGTGCAACAAACTCACCAGATAGCTCTTCCTCTATAGACCATATTCAACCCTCACAAGAGGTTGGAGAAGCTAGCCAAATGGATATTGCTGATTATGATGCTTTGTTGGATTGGGAGCAAGTGGATTGGTTCTTAGGGTCGGAGTCATGA 768 0.4076 MDNMPPGYRFYPTEEELISFYLHKMLEGEKEYTIRTVIPVVNIYDYNPSQLPQISGEASMRDTEQWFFFIPRQESEVRGGRPKRLTNTGYWKATGSPNHVYSSDNRIIGVKRTMVFYSGRAPNGKKTDWKMNEYKAIQIDEASSSNKVAPKLRQEFSLCRVYKKSKCLRAFDRRPPPRRVTTHVQNAQEHQKDSTCEHDVQISMDISATNSPDSSSSIDHIQPSQEVGEASQMDIADYDALLDWEQVDWFLGSES 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03535 255 Gene3D NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Mepo3g03535 255 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 212 - -
Mepo3g03535 255 MobiDBLite consensus disorder prediction 173 230 - -
Mepo3g03535 255 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Mepo3g03535 255 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Mepo3g03535 255 MobiDBLite consensus disorder prediction 200 229 - -
Mepo3g03535 255 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03535 Mepo-Chr3 45165997 45168073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03535 2 249 NAC Transcription Factor Family AT5G22380 45.161 1.58e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g03535 NAM 1.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03535 - - psat:127125619 422.935