Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03522 ATGGATCCATTAAGCCCTGCAGTCCTTGTCAATGCAGAACTGTTGCCCTTTTATGTCGGAAGAAGGGTTCGTACAGTGATGCAGGTTGTGCGATCTGACGCTCTAGCTGTCATTGGAAAATCACCAGATGAGAAGCAGTTGATTGTAAAAGGATCACCCCCTGCTCCTCTTACAAGTTTTGTAGAAGTTATTGGTATTGTTAACAGTGACAAGTCTATCAAAGCCGAGTTATGGACCAACTTTGGTGATGAAATTGATATGCTCAGCTACCATAAGCTATGTCAGCTTGCAAATGGAGAATTTAAACACTTGTTCCTTTGA 321 0.4206 MDPLSPAVLVNAELLPFYVGRRVRTVMQVVRSDALAVIGKSPDEKQLIVKGSPPAPLTSFVEVIGIVNSDKSIKAELWTNFGDEIDMLSYHKLCQLANGEFKHLFL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03522 106 SUPERFAMILY Nucleic acid-binding proteins 6 105 IPR012340 -
Mepo3g03522 106 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 106 - -
Mepo3g03522 106 Pfam Replication factor A protein 3 7 102 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo3g03522 106 CDD RPA3 6 105 - -
Mepo3g03522 106 Gene3D - 4 106 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03522 Mepo-Chr3 45030850 45032390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03522 1 106 Core DNA Replication Machinery Family AT4G18590 58.491 4.78e-47 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03522 K10740 - gmx:100306641 166.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03522 3 45030850 45032390 Mepo3g03522 3 45030850 45032390 ECH
Mepo3g03522 3 45030850 45032390 Mepo4g02930 4 38319038 38327326 PCT