Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03489 ATGGCGGAAGAGCACCGATGTGAAACTCCAGAAGGTCACAGACTCTGCGCAAACAACTGCGGCTTCTTCGGCAGTTCAGCTACGATGAATCTCTGTTCAAAATGTTACAGAGATATTCATTTGAAGGAACAAGAACAAGCGAAAACCAAATCAACAATCGAAACGGCACTCTCCTCAGCCTCCGCTTCCACCGCCGTGGTGGTCGCTGCTTCGCCGGTTGCGGAAATCGAATCTCTCCCTCAACCTCAACCACCAGCGTTGACCGTACCGTCGATCGTGCCTGAAGCATTGGACAATTCACAAGGACCGGTTCAACCAAACCGGTGCGGAACGTGTAGAAAACGGACCGGGTTAACCGGGTTCAAGTGTAGATGTGGAATCACGTTTTGCGGGTCCCACAGGTATCCGGAGAAACATGAGTGCTGTTTTGATTTCAAAGCGGTGGGGAGAGAGGAGATAGCGAAAGCGAATCCTGTGATCAAAGCTGATAAGCTCAGAAGAATTTGA 507 0.503 MAEEHRCETPEGHRLCANNCGFFGSSATMNLCSKCYRDIHLKEQEQAKTKSTIETALSSASASTAVVVAASPVAEIESLPQPQPPALTVPSIVPEALDNSQGPVQPNRCGTCRKRTGLTGFKCRCGITFCGSHRYPEKHECCFDFKAVGREEIAKANPVIKADKLRRI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03489 168 SUPERFAMILY AN1-like Zinc finger 96 163 IPR035896 -
Mepo3g03489 168 Gene3D - 1 63 - -
Mepo3g03489 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 62 - -
Mepo3g03489 168 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Mepo3g03489 168 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Mepo3g03489 168 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Mepo3g03489 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
Mepo3g03489 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 168 - -
Mepo3g03489 168 Gene3D - 89 164 IPR035896 -
Mepo3g03489 168 FunFam Zinc finger AN1-type containing 6 88 164 - -
Mepo3g03489 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Mepo3g03489 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03489 Mepo-Chr3 44798076 44799753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03489 1 168 C2H2 Transcription Factor Family AT3G52800 53.757 1.28e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03489 - - gmx:100789686 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03489 3 44798076 44799753 Mepo3g03489 3 44798076 44799753 ECH
Mepo3g03489 3 44798076 44799753 Mepo4g02387 4 31995090 31995560 PCT