Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03478 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGTAAGGGAGGACCGAAGTATAGGGAAAGGCGCTATAGAGATTTGCCAGTCCAAGTCTCAGAACAAAATGTCTGAGAAAAAAAATAAGAAGCCTTTGGCGCTGAACATGGGATACAAGGATAAAATAGATGATGAAATTAACAAGCTGTTTGAATCAATTGCTCTTAAATCTTCTTCAAGGGATTTGGGCATTTCACAAGATGGTACAAGTCATAAGCTGAAAAACACCTTAAAAAAGCCGATGACAATGGGTGTTCCGCGGTCTCCACAAGTTGGAACTTCTGAGGCTGTTAATTTGAAGCAGGCACTAAGAGACCTTTGTATATCTAAGGCATCGGAAGTGGCTTCCATGAAACGGCTATCGAAGTCAATAGCTTCTCCAAGAATATCAGAGGTTGGGAGGATACAGACATTGTACGGTACGGTGGTAGATGAAGCCAGTCATTCTGGGCCTCACATTGCTGAGAGTAAAGGGCGTAGAATGGAAATATCTCTAGTGCTAGAAAAAAGCCAGTCACTCTCGTTCAATAAAACATCTCAATCTCATCAAACTACCCAAATCACATCATCGAGTCAAGCCATTAATTCTGCTTGGGAAATTGCTGTTGCAACTAATCAACTTGATTCCAGGACTTTATCGTCGCAAAGTGATTCAGCATGTTCATCAAGTAGAGTTGGGTCTCAATCACAGCGTTTGGTACCTGTTCAACCAGAGAAGCAAACCCCTGCATCTTCTTCATCTCTTTCTAATACAGCTGAAAGCAAATTAGAGTTGCCTGTTAATGCTTCTTCACCTAAAAAGTTAGGCAATAAAGTGGCTGTGTCAAATTCTGGACGGAAAGGTAGGTTGCAGACAGCATCTTCTTCATCTACTTCTATTAATGGCAGCAGGGTTAACAAACAACCACACCATACCCCTCGCACAATTAAAATGGTCATTAAGAACAAAATTCCGAGTAAGAAGAAAGTGAAGGAGGATTCGGGTTCTGCATCATGTGATCCTACAGCAAATGAAGTTAGCAAGTCTGTTCCTGGCATAGCTCAGCTGGTTTGTGAAAGATGTAGGTGCGCTTTAGAAGATACAAGGGAAGAAAAAAACCAAGAGGTAATGGCCTTGGACTCTACTAGTCCTGGAAATGGAGTGAACTTTATTAACGTGCACTCTGGTTCAAATAAACCTTATTCGGCATCAAATAATGGTAATATAAGCAAAGCAGTTGCAAAGGTGGAGAAGATTCAGAAGAACACCAAGTTGAAAGAGCAACTTGAGTTCTCACAAAGCTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACCAGTACCAGTGATGAGAGCAACATGAGTGGCTCAAGTTGCGGCAGTAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATTCGACATGCTCAAATGCAGCATGGAGTTTTGGGTTTGAGACATTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTTGCCGAACTAATTGGCACAAGTTGTTTGTTTGCTATTAAGGTCATGGACATCGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATGCTGGACCATCCGTTTCTTCCTACATTGTATGTGCAATTTACATCAGATAATCTTTCATGTTTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATGTTTTTCAGAGCTAGCTGCAAGGTTTTATGTTGCTGAAGTCCTCCTTGCTTTGGAGTATTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACTGATTTTGATCTGTCATTGAGGTGTGCTGTTAGCCCAACACTTCTGAAGTCATCTTCTAATATTGACCCTGCAAAAGTTTCTGGTCTTGGTGCACAATCAAGTTGCATTGAGCCATTGTGCATTCAACCATCTTGTAAAGTTTCATGCTTCAGTCCCAGATTCCTACCTGCTGCTGCAAAAGCAAGAAAATTAAAAGTCGACCCTCTTACCCAGATCAGATCACTTCCGCAACTTGTGGCCGAGCCCACTGATGCAAGGTCAAACTCATTTGTTGGTACACATGAATACTTGGCGCCTGAGATCATCAAAGAAGAGGGACATGGTGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGAAGAACACCCTTTAAAGGTTCTAACAACGAAGAAACATTAGCAAACGTGGTGTTGCAAAGTCTTGGATTCCCTGATGACCCATTTGTCAGTTTCGAAGCTAGAGATCTGATCAGAGGGTTGTTAGTTAAAGAGCCTGAAAACCGTTTGGGTTCACAGAAAGGGGCCGCCGAGATTAAACAACATCCCTTCTTCGAGGGCCTAAACTGGGCCTTAATTCGTTGCGCTATCCCACCAGAACTTCCAGAGTTTTGTGATTTTGGAGTTTTAGACATGGCATCACAAGGCAAGGGTGCAAAGTATTTAGAGTGTAATGTAGGACAGCATGTGGAATTCGAGTTGTTTTAA 2631 0.4215 MGSFSGTCEIVEVREDRSIGKGAIEICQSKSQNKMSEKKNKKPLALNMGYKDKIDDEINKLFESIALKSSSRDLGISQDGTSHKLKNTLKKPMTMGVPRSPQVGTSEAVNLKQALRDLCISKASEVASMKRLSKSIASPRISEVGRIQTLYGTVVDEASHSGPHIAESKGRRMEISLVLEKSQSLSFNKTSQSHQTTQITSSSQAINSAWEIAVATNQLDSRTLSSQSDSACSSSRVGSQSQRLVPVQPEKQTPASSSSLSNTAESKLELPVNASSPKKLGNKVAVSNSGRKGRLQTASSSSTSINGSRVNKQPHHTPRTIKMVIKNKIPSKKKVKEDSGSASCDPTANEVSKSVPGIAQLVCERCRCALEDTREEKNQEVMALDSTSPGNGVNFINVHSGSNKPYSASNNGNISKAVAKVEKIQKNTKLKEQLEFSQSSKSSQGEYSSSTSTSDESNMSGSSCGSRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDIEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFSELAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSNIDPAKVSGLGAQSSCIEPLCIQPSCKVSCFSPRFLPAAAKARKLKVDPLTQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLGFPDDPFVSFEARDLIRGLLVKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPEFCDFGVLDMASQGKGAKYLECNVGQHVEFELF 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03478 876 MobiDBLite consensus disorder prediction 315 329 - -
Mepo3g03478 876 FunFam serine/threonine-protein kinase D6PK-like 721 844 - -
Mepo3g03478 876 FunFam Serine/threonine-protein kinase D6PK-like 492 577 - -
Mepo3g03478 876 ProSiteProfiles Protein kinase domain profile. 494 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03478 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Mepo3g03478 876 MobiDBLite consensus disorder prediction 432 467 - -
Mepo3g03478 876 MobiDBLite consensus disorder prediction 225 270 - -
Mepo3g03478 876 Gene3D Transferase(Phosphotransferase) domain 1 723 840 - -
Mepo3g03478 876 Pfam Protein kinase domain 723 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03478 876 Pfam Protein kinase domain 495 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03478 876 Gene3D Phosphorylase Kinase; domain 1 492 573 - -
Mepo3g03478 876 MobiDBLite consensus disorder prediction 289 314 - -
Mepo3g03478 876 SUPERFAMILY Protein kinase-like (PK-like) 469 843 IPR011009 -
Mepo3g03478 876 SMART serkin_6 494 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03478 876 Gene3D Transferase(Phosphotransferase) domain 1 574 642 - -
Mepo3g03478 876 MobiDBLite consensus disorder prediction 225 351 - -
Mepo3g03478 876 CDD STKc_phototropin_like 492 844 - -
Mepo3g03478 876 FunFam serine/threonine-protein kinase D6PK-like 578 645 - -
Mepo3g03478 876 PANTHER FLIPPASE KINASE 1-RELATED 244 845 - -
Mepo3g03478 876 MobiDBLite consensus disorder prediction 432 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03478 Mepo-Chr3 44721045 44725884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03478 1 876 AGC Kinase Gene Family AT3G52890 51.455 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo3g03478 Pkinase 6.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03478 - K08286 mtr:11427174 1572.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02412 4 32218685 32223902 Mepo3g03478 3 44721045 44725884 ECH
Mepo3g03478 3 44721045 44725884 Mepo3g03478 3 44721045 44725884 ECH
Mepo3g03478 3 44721045 44725884 Mepo4g02412 4 32218685 32223902 PCT