Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03471 ATGGACTTTCATATGAAACAACAATGGAGAAACCAACAGCATGAGTCAGAGAAACAATATTCCACAAAGATGCCAAAACTTCTTCACCCTGCTGCTGCTCAATCCCATTCCCATTCCCATCAACACCACCAACAATCACCTGTTTCTCCTGCACTTCCTTTGTTTGTACCTCAACCCAACACCAAAGTCACCAACTTGTCAGATTCAGCATCAGCTTCCAACAACAGATTCCCCAGAATAGGAATGGGAAGCCATTTCAGCTTATCTCAGTGGCAAGAACTTGAGTTACAGGCTTTGATATTTAGGTACATGTTGGTTGGTGCTTCTGTTCCTCCTGAACTTCTTCAACCTATCAAGAAAAGTCTTCTTCATTCTTCTCCTTATTTTCTTCAACATTATCAACCTACAACATTGTTGCAAAGTGGGTATTGGGGAAGAGGAGCAATGGATCCAGAGCCAGGTCGTTGCCGGAGAACAGACGGTAAAAAGTGGCGGTGTGCGAGGGATGTGGTGGCTGGACAAAAGTACTGTGAAAGACACATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTTCCCACACCAACTAGTACTGCCGGTGGTGGTGGTTCTTTCTCTGCTTTGTCTTCACAGCCTCCTGTTACTTCCTCATTCAAATCTCCTTTTGATCTTCACTTTAATCAACGCTCCACTGGGACCAAAATTGAAGAGAAGAGCTTATTTGAAAGCGATGATCATATTCATGTGGGTGGGGATGGAAGACCAGGTGGGCAAATGCTAAGGCATTTCTTTGACGATTGGCCACGATCACTGCAAGAGTCTGACAATGCTGAAAACAATGGTGGGTCATCCTCCACATGTCTCTCAATTTCAATGTCAGGAAATAACAACACTTCTTCTTCTTCAGATGTGTCATTGAAATTGTCCACTGGCTATGGAGAAGAACCTTGTCCAAGAAATGAGAATGTGGGCCTAGTACATACTGAGCAGCAACAACAACAACTTCAATTGAATTGGGTCGGAGGATGGAATTCAGGTAATCAAGTGTCTTCAATGGGAGGACCACTTGCTGAGGCACTTAGATCATCTACTTCAACTTCTTCACCTACTAGTGTTTTACATCAATTGCCACGTTGTTCTGGTTCTGAAGCCAGCTACATTAGCACCTAA 1176 0.4388 MDFHMKQQWRNQQHESEKQYSTKMPKLLHPAAAQSHSHSHQHHQQSPVSPALPLFVPQPNTKVTNLSDSASASNNRFPRIGMGSHFSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSLLHSSPYFLQHYQPTTLLQSGYWGRGAMDPEPGRCRRTDGKKWRCARDVVAGQKYCERHMHRGRNRSRKPVELPTPTSTAGGGGSFSALSSQPPVTSSFKSPFDLHFNQRSTGTKIEEKSLFESDDHIHVGGDGRPGGQMLRHFFDDWPRSLQESDNAENNGGSSSTCLSISMSGNNNTSSSSDVSLKLSTGYGEEPCPRNENVGLVHTEQQQQQLQLNWVGGWNSGNQVSSMGGPLAEALRSSTSTSSPTSVLHQLPRCSGSEASYIST 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03471 391 MobiDBLite consensus disorder prediction 273 323 - -
Mepo3g03471 391 ProSiteProfiles WRC domain profile. 150 194 IPR014977 -
Mepo3g03471 391 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g03471 391 MobiDBLite consensus disorder prediction 34 48 - -
Mepo3g03471 391 MobiDBLite consensus disorder prediction 275 310 - -
Mepo3g03471 391 PANTHER GROWTH-REGULATING FACTOR 5 53 300 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mepo3g03471 391 ProSiteProfiles QLQ domain profile. 85 120 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo3g03471 391 MobiDBLite consensus disorder prediction 1 50 - -
Mepo3g03471 391 SMART QLQ_2 84 120 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo3g03471 391 MobiDBLite consensus disorder prediction 192 214 - -
Mepo3g03471 391 MobiDBLite consensus disorder prediction 353 391 - -
Mepo3g03471 391 Pfam QLQ 85 118 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo3g03471 391 Pfam WRC 151 193 IPR014977 -
Mepo3g03471 391 MobiDBLite consensus disorder prediction 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03471 Mepo-Chr3 44619418 44622380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03471 1 378 GRF Transcription Factor Family AT3G52910 47.174 5.12e-81 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mepo3g03471 WRC 3.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03471 - - aip:107648821 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03471 3 44619418 44622380 Mepo3g03471 3 44619418 44622380 ECH