Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03459 ATGCCTGAAAACAATACCACTTATGCATCATCATCATCAGGCAAAGTTTCAACTGGCCGTCACCCGGTGTACCGAGGAGTGAGGCGTAGGAGTAACGGAAAATGGGTATCTGAAATTCGCGAACCGAAAAAACCTAACAGAATTTGGTTAGGGACATTTCCAACACCTGAAATGGCAGCTATTGCATATGATGTAGCTGCCCTCGCTCTTAAGGGTAAAAATGCTGAATTGAATTTCCCTAATTCTTCTTCATCTTTTCCTGTTCCTGCTTCTTCTTCTGCCCACGATATTCAAATGGCGGCAGCTAGTGCTGCAGCTGCTCTAGGTGCAGCCAATGATGCACTCATGAACGAGGGAAGTAACCATAATGTTTCAGTGGAACCACAAGAGTTTTTTTCAGGTGGCAATGAGAACAGTTATAATGTTAATGAATTTGTTGATGAGGATTTAATATTTGATATGCCTAATGTTTTGGTTAATATGGCTGAAGGAATGCTACTCAGTCCTCCTCGCTTTGATTTTGTCAGTAATGACTATGACCATGCACCAGCTGAAAACATGTCATGTGATGATCAAAACCTTTGGAGTTATCCTTATTTTCCATAA 606 0.4125 MPENNTTYASSSSGKVSTGRHPVYRGVRRRSNGKWVSEIREPKKPNRIWLGTFPTPEMAAIAYDVAALALKGKNAELNFPNSSSSFPVPASSSAHDIQMAAASAAAALGAANDALMNEGSNHNVSVEPQEFFSGGNENSYNVNEFVDEDLIFDMPNVLVNMAEGMLLSPPRFDFVSNDYDHAPAENMSCDDQNLWSYPYFP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03459 201 CDD AP2 24 82 IPR001471 GO:0003700|GO:0006355
Mepo3g03459 201 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Mepo3g03459 201 MobiDBLite consensus disorder prediction 1 31 - -
Mepo3g03459 201 Gene3D AP2/ERF domain 23 81 IPR036955 GO:0003700|GO:0006355
Mepo3g03459 201 PRINTS Ethylene responsive element binding protein signature 62 82 IPR001471 GO:0003700|GO:0006355
Mepo3g03459 201 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Mepo3g03459 201 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Mepo3g03459 201 MobiDBLite consensus disorder prediction 1 18 - -
Mepo3g03459 201 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Mepo3g03459 201 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Mepo3g03459 201 Pfam AP2 domain 22 72 IPR001471 GO:0003700|GO:0006355
Mepo3g03459 201 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 14 197 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03459 Mepo-Chr3 44510495 44511566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03459 13 198 AP2-EREBP Transcription Factor Family AT2G36450 61.497 2.51e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo3g03459 AP2 2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03459 - - gmx:100813781 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03459 3 44510495 44511566 Mepo3g03459 3 44510495 44511566 ECH
Mepo4g02418 4 32278806 32279384 Mepo3g03459 3 44510495 44511566 PCT