Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03456 ATGGAAATGGAAGACCATAATCATCATCATCATCAACATCAACAACAACAACAACACTATGATAGTAATAGTATCACTGATCTCAGACAACTCATTAATATTGTTCCAAGATCAACTACCAATTTCCCTACGGCGGAGCTATTCCCCGCCGGCAACCCACATCAACAACATTATGAGATGATGATGTTTGGTAGACAAGTAGCAGATATAATGCCTCGTTGTCTTCATGATTTTGTTTCAACAGATTCAGCTGCTGTTGCTGTTACTGTTGCTACTGCCACTCCTACCAACACTACAACTAGTGCTTCAACTCCTTCATTTAGTGGTAACTTAGAAGCTGAAACTACTGGTTTCATTGGTGTTGATGCTTCAACTGGAAGATGGCCTAGACAAGAGACTCTTACACTTCTTGAGATTAGATCTCGTCTTGATCCTCAATTCAAAGAAGCTACTCAAAAAGGTCCTCTTTGGGATCAACTTTCTAGGATAATGTGTGAAGAACATGGCTATCAAAGGAGTGGGAAAAAATGCAGGGAGAAGTTTGAGAATCTATACAAATACTACAAGAAGACCAAGGAAGGAAAAGCAGGAAGACAAGATGGGAAGCACTACAGATTCTTTCGTCAACTTGAAGCTTTATATGGAGAAAACAATAACCCTTCTTCATCTTCACTCCCGCAAAACAATTTTTGTACCAACAACAATCAAGAAATGTTTCATTCCCACATTAACAAACATTGTGATAGTCTCAGCCTCACAAACTCCACTGAATTCGACACATCATCGTCAGATGATGATGACAATGATCATAGTACTCATGAGGGGATCAAAGAGAGTGAGTACTCCATGGATAAGAGAAAAAAGAGGAGTAGTGGAAGAAGCTTCTGGAAGGTAAAGATAAAAGACTTCATTGATTCACAGCTGAAGAAATTGGTGGAGAAGCAAGAGGAATGGTTGGAGAAACTCACAAAGACATTGGAACAAAAGGAAAAAGAGAGGGTGTTAAGAGAAGAAGAGTGGAGGAAACAAGAGAAAGAAAGGTTGGAAAAAGAGCATAAATTTTGGGCCAAAGAAAGAGCATGGATTGAAGCTAGGGATGCTGCTTTAATGGAAGCTTTGCAAAAATTAACAGGTAATAATGATGAGATAATAAAGACTCAATCTTCTTCTCATGATGGAAATAAGAAGAGAAAGGAAAACTCAAGAAGTTGTTTTTACTTTGATGAGAACAACAATGTTGATCGGTCTTGTTTATATAATGTTAACAATGGAGATGGAGCTGGTTCCTATTGTGATGTTAATGATCAAAGAGAAGAACTTGGGAGAGTACAAACAAATGACGGTTCAAATTCTAATAATGTTGTTGCGGCTGAAAGTTGTTTCCCGTTCCTGATGAGTACTGAGGGAGGAAATTTGTGGGAGAATTACAACTTGAAGGTTAACAAAGCAAACCAAAACCAGTGA 1464 0.3832 MEMEDHNHHHHQHQQQQQHYDSNSITDLRQLINIVPRSTTNFPTAELFPAGNPHQQHYEMMMFGRQVADIMPRCLHDFVSTDSAAVAVTVATATPTNTTTSASTPSFSGNLEAETTGFIGVDASTGRWPRQETLTLLEIRSRLDPQFKEATQKGPLWDQLSRIMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENNNPSSSSLPQNNFCTNNNQEMFHSHINKHCDSLSLTNSTEFDTSSSDDDDNDHSTHEGIKESEYSMDKRKKRSSGRSFWKVKIKDFIDSQLKKLVEKQEEWLEKLTKTLEQKEKERVLREEEWRKQEKERLEKEHKFWAKERAWIEARDAALMEALQKLTGNNDEIIKTQSSSHDGNKKRKENSRSCFYFDENNNVDRSCLYNVNNGDGAGSYCDVNDQREELGRVQTNDGSNSNNVVAAESCFPFLMSTEGGNLWENYNLKVNKANQNQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03456 487 MobiDBLite consensus disorder prediction 1 21 - -
Mepo3g03456 487 Coils Coil 308 339 - -
Mepo3g03456 487 PANTHER FI21293P1 55 379 - -
Mepo3g03456 487 FunFam trihelix transcription factor PTL-like 128 190 - -
Mepo3g03456 487 MobiDBLite consensus disorder prediction 1 16 - -
Mepo3g03456 487 MobiDBLite consensus disorder prediction 256 285 - -
Mepo3g03456 487 Pfam Myb/SANT-like DNA-binding domain 127 213 IPR044822 -
Mepo3g03456 487 ProSiteProfiles Myb-like domain profile. 120 185 IPR001005 -
Mepo3g03456 487 Gene3D - 128 190 - -
Mepo3g03456 487 MobiDBLite consensus disorder prediction 265 285 - -
Mepo3g03456 487 CDD GT1 127 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03456 Mepo-Chr3 44491775 44494404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03456 127 403 Trihelix Transcription Factor Family AT5G03680 54.698 2.95e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo3g03456 Myb_DNA-bind_4 6.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03456 - - psat:127125684 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03456 3 44491775 44494404 Mepo3g03456 3 44491775 44494404 ECH
Mepo3g03456 3 44491775 44494404 Mepo4g02421 4 32335778 32339250 PCT