Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03449 ATGGAGTTTTGGGGTGTTGAGGTAAAACTTGGTGAATCACTCAAGGTTGTTCCAGAAAATAGCGAGCTTATCCACATTTCATCGGCATGTTTGGGGGAGGTCAGCAAGGATAAAGGGAGTGACCCGGTATCCCTGTATGTGAAGTTTGATGGTCAGAAGCTTCAACTTGGAACACTTTCTTCAGAAAAATTTCCTCAGACATCTTTTGATTTGGTTTTTGGGAAGAAATTTGAGCTATCCCATAACTGGAAATATGGGAGCGTCTTCTTTTCTGGATTTAGAATCGAATGCGAACCGGAACATGATTCTAGTGAAGATGAAGATTCTGATGATACTGATTCTGAAGAGGAAGATATTCCACTTACTGCTGCTAATGGGAAACCTGTGTTGGAGGTGAATGGTGCCAAACCCGGTGTAAATGCATCAAAACAGAAAAAGAATCAGAAGGATGCTAGTACTGACGACAGTTCAGATTCATCTGATGAGGATTCTAGTGAAGATGAGCTCATGGCGAATGGTCAAATTAAAAGTAGTAGTGAAGATGAAAGCGATGAAGATTCTGATGAGGAGACACCGAAGAAGACTGAAGGGAGCAACAAGAGGGTTGCTGAATCTTCCAAGGAAACACTTGTACCTGTGAAGAAGGCAAAATTTGTCACTCCAGAGAAGACTGGTGGCAGGAGTAGTGTCCACGTTGATACTCCTTACCCTAAGCAGGCTGGTAAATCTGCTGCAAATAACAAGCAGCCAGAGAAGCAGGAGACTCCAAAGTCTAGTGGAGATTACAGCTGCAAGCCCTGTAATAGGTCTTTTAAGACTGAAGATGCCTTAGGTTCTCATAATAAGGCCAAGCACAGTGCCAAGTGA 867 0.4302 MEFWGVEVKLGESLKVVPENSELIHISSACLGEVSKDKGSDPVSLYVKFDGQKLQLGTLSSEKFPQTSFDLVFGKKFELSHNWKYGSVFFSGFRIECEPEHDSSEDEDSDDTDSEEEDIPLTAANGKPVLEVNGAKPGVNASKQKKNQKDASTDDSSDSSDEDSSEDELMANGQIKSSSEDESDEDSDEETPKKTEGSNKRVAESSKETLVPVKKAKFVTPEKTGGRSSVHVDTPYPKQAGKSAANNKQPEKQETPKSSGDYSCKPCNRSFKTEDALGSHNKAKHSAK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03449 288 MobiDBLite consensus disorder prediction 240 266 - -
Mepo3g03449 288 FunFam Histone deacetylase HDT1 1 99 - -
Mepo3g03449 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 262 288 IPR013087 -
Mepo3g03449 288 MobiDBLite consensus disorder prediction 190 211 - -
Mepo3g03449 288 ProSitePatterns Zinc finger C2H2 type domain signature. 264 285 IPR013087 -
Mepo3g03449 288 MobiDBLite consensus disorder prediction 99 288 - -
Mepo3g03449 288 Pfam C2H2-type zinc finger 262 286 - -
Mepo3g03449 288 Pfam Nucleoplasmin-like domain 3 92 IPR041232 -
Mepo3g03449 288 MobiDBLite consensus disorder prediction 101 118 - -
Mepo3g03449 288 Gene3D Nucleoplasmin core domain 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03449 Mepo-Chr3 44427738 44431914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03449 1 287 C2H2 Transcription Factor Family AT5G03740 44.186 6.05e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g03449 NPL 2.3e-09 CL0055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03449 3 44427738 44431914 Mepo3g03449 3 44427738 44431914 ECH