Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03408 ATGGACACAGTGTTGGTACCTCCTTGGCTTGAACCATTGTTGAAAACACCGTTTTTCAACATTTGTCGGATTCACGCTGATGCAGCTAGAAATGAGTGTAACATGTATTGCTTAGATTGCAACAATGGTGATGGTGCTTTTTGCTTTTATTGTCGTTCTTCAAGACACAAAGACCATCAAGTCATTCAGATAAGAAGATCTTCGTATCATGATGTAGTTCGTGTGTCAGAGATTCAGAAAGTGTTGGACATAAGTGGAGTGCAAACATATGTGATAAACAGTGCTAGAGTTTTGTTCTTGAATGTGAGGCCTCAACCAAAATCTGGGAAAGGAGTAGCACACATTTGTGAGATTTGTGGAAGGAGCTTGTTGGATTCATTTCGGTTCTGTTCTTTGGGATGTAAGCTTGAAAGAATAAAGAAAAATGGAGATGCAAGCTTTGCTTTGGAGGGTAAGAATGAAGGATTGACAATGGAAGGAGTGTCAAGTAGTAGATCAGAAGAAGAATTGCGTGAAGGCTCAACACAAGATATGTATCCTCTCACGCCTCCTCCACCTCCTTTAAATGCAAGGAGAAGAAAAGGTATACCTCATAGGGCACCTTTTGGTTCCTCATTCTAA 621 0.4042 MDTVLVPPWLEPLLKTPFFNICRIHADAARNECNMYCLDCNNGDGAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDSFRFCSLGCKLERIKKNGDASFALEGKNEGLTMEGVSSSRSEEELREGSTQDMYPLTPPPPPLNARRRKGIPHRAPFGSSF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03408 206 Pfam PLATZ transcription factor 65 136 IPR006734 -
Mepo3g03408 206 SUPERFAMILY B-box zinc-binding domain 19 66 - -
Mepo3g03408 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 202 - -
Mepo3g03408 206 MobiDBLite consensus disorder prediction 158 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03408 Mepo-Chr3 44133204 44135718 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mepo3g03408 PLATZ 8.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03408 - - psat:127125735 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03408 3 44133204 44135718 Mepo3g03408 3 44133204 44135718 ECH
Mepo3g03408 3 44133204 44135718 Mepo4g02469 4 32906922 32909049 PCT