Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03403 ATGTTCCGATTTTTGGAATGTACAGAGTGTGCATCTCTATCAAGTATTCCACGTGGTGACTGGTACTGTCAATTTTGCCAAAACATGTTCCAGAGGGAAAAGTTTGTCGCATACAATGTCAATGCTTTTGCTGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAGCAAATCACCAAGAGATGCATTCGCATAGTCAAAGACATTGATGCTGAGCTTAGTGCATGTGCTTTATGCAGGGGTGTTGACTTCAGCAAATCTGGCTTTGGTCCACGCACAATAATACTCTGTGATCAGTGTGAAAAGGAGTATCATGTTGGCTGTTTGAGGGATCACAAGATGGCATTTCTAAAGGAATTGCCAAAAGGTAACTGGCTTTGTTGCAATGATTGCACGAGAATACATTCTACTTTGGAGAATGTTTTAGTTAGAGGGGCTGAGAGGCTCCCTAAATCTCTCTTGGCTGTTATAAAGAAAAAGCAAAAGGAAAAAGGATTGGATCCCATCAATGATATTAATGTGAGATGGAGGCTTCTTAGTGGGAAAAAAGCGTCTCCTGAAACCCGACCATTGCTTTTGGAGGCTGTCTCTATCTTTCATGAATGCTTCGATCCTATAGTTGATGCAGTTAGCGGGCGTGACCTTATTCGAGCAATGGTTTATGGAAAGAGTGTGCGGGGTCAAGAGTTTGGAGGAATGTATTGTGCATTACTAATAGTCAATTCATCCGTGGTATCTGCGGGCATGCTTCGAATCTTCGGCACAGATATTGCTGAACTTCCTTTAGTTGCAACAAGTAACAGTCACCATGGGAAGGGCTACTTCCAAGCACTATTCTCTTGCATTGAGAGGCTCTTGGCTTTCATGAAAGTAAAGAACCTTGTGCTACCAGCTGCAGAAGAAGCACAATCCATATGGACAGATAAATTTGGGTTTAGCAAGATTAAACCAGACGAGCTTGCCAACTACAGAAGGAACTGCAATCAGTTTGTGACCTTCCAAGGGACAAATATGCTTCATAAAATGGTGCCTCCATGTCGAGTCATCAATAATCATCCCTGA 1059 0.4259 MFRFLECTECASLSSIPRGDWYCQFCQNMFQREKFVAYNVNAFAAGRVEGVDPIEQITKRCIRIVKDIDAELSACALCRGVDFSKSGFGPRTIILCDQCEKEYHVGCLRDHKMAFLKELPKGNWLCCNDCTRIHSTLENVLVRGAERLPKSLLAVIKKKQKEKGLDPINDINVRWRLLSGKKASPETRPLLLEAVSIFHECFDPIVDAVSGRDLIRAMVYGKSVRGQEFGGMYCALLIVNSSVVSAGMLRIFGTDIAELPLVATSNSHHGKGYFQALFSCIERLLAFMKVKNLVLPAAEEAQSIWTDKFGFSKIKPDELANYRRNCNQFVTFQGTNMLHKMVPPCRVINNHP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03403 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 133 IPR013083 -
Mepo3g03403 352 Gene3D - 172 343 - -
Mepo3g03403 352 SMART PHD_3 74 131 IPR001965 -
Mepo3g03403 352 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 71 133 - -
Mepo3g03403 352 SUPERFAMILY FYVE/PHD zinc finger 65 128 IPR011011 -
Mepo3g03403 352 PANTHER AUTOIMMUNE REGULATOR 8 341 - -
Mepo3g03403 352 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 230 317 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03403 Mepo-Chr3 44070160 44075509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03403 9 349 PHD Transcription Factor Family AT2G36720 56.012 9.57e-143 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03403 - - cam:101512705 663.685