Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03402 ATGAGATTCAACAGAACCCTCTTTTGGCTTTCTGGTTTTGTCATCCTTCTCTTTTCTATCATTATTGTTCGTTACACCACACCACCTTCAAACACCTCTAACACTGCCACTAGTAGTTCTCAAGGTAGTTTCACTTTTCAACTTGGCATATTAAGCAAGATTATAAAGCTAAGTGGTGCTCAAGATTTTGTGTCTTTGTTGATAACAAGTATTGCGAGTACAAGACATCATCATTGGATGAGGCATAAGGAAAAATGTGACAATGCCAAATGGGCTTCCCAACTAATTTTAGACTATAATGCAACCATCACTTTCACTGTGGACTTAAAGGGTCATGCTAACTTTAGCAGCGTGCAGAAAGCGATTGACGCGGTTCCTGAATCTAGCTCTAATACAACCCTTATTATAATCAATTCCGGTACATACAGAGAGAAGGTAGTGGTCCAAGCCAACAAAACAAACTTAATACTACAAGGTCAAGGCTATCTTAATACAATCATAGAATGGAATGACACTGCAAATTCCACTGGAGGGACATCCTATAGCTACTCATTTGCGGTTTTTGCTTCAAAGTTCACTGCTTACAACATTAGCTTTAAGAACACTTCTCCTCCACCTTCACCAGGAGAGGTTGGAGCACAAGCAGTGGCACTGAGAGTTACCGGTGACCAAGCAGCATTCTATGGATGTGGTTTCTATGGTGCGCAGGACACACTCAATGATGACAGTGGAAGACATTATTTTAAGGAATGTTTCATTCAAGGATCCATTGATTTTATATTTGGAAATGCTAGATCCCTTTACGAGGATTGTACCATAAACTCTATAGCAAAACAAGATATGGTTGGGATTGGTGGATCTATCACAGCTCATGGACGACAATCATTGAAGGAAGAAACAGGATTTTCCTTTGTGAATTGCAACATTGTTGGAAGTGGAAAAGTGTGGCTTGGAAGAGCTTGGGGAGCATTTGCCACAGTGGTTTTTTCAACGACAAACATGTCTGATGTCGTAGCTGCCGAGGGATGGAACGATTGGAGAGATCCATCTAGAGACCAGAGCGTCTTCTTTGGGGAGTACCATTGTACAGGACTTGGAGCAAATTATACATCTAGAGTCTCTTATGCAAGACAACTCAGGGATTTTGAAGCAATCTCCTATATAAATGTTTCATACATTGATGGAAATGATTGGCTTCTTAACTATTTAACTTAA 1215 0.4016 MRFNRTLFWLSGFVILLFSIIIVRYTTPPSNTSNTATSSSQGSFTFQLGILSKIIKLSGAQDFVSLLITSIASTRHHHWMRHKEKCDNAKWASQLILDYNATITFTVDLKGHANFSSVQKAIDAVPESSSNTTLIIINSGTYREKVVVQANKTNLILQGQGYLNTIIEWNDTANSTGGTSYSYSFAVFASKFTAYNISFKNTSPPPSPGEVGAQAVALRVTGDQAAFYGCGFYGAQDTLNDDSGRHYFKECFIQGSIDFIFGNARSLYEDCTINSIAKQDMVGIGGSITAHGRQSLKEETGFSFVNCNIVGSGKVWLGRAWGAFATVVFSTTNMSDVVAAEGWNDWRDPSRDQSVFFGEYHCTGLGANYTSRVSYARQLRDFEAISYINVSYIDGNDWLLNYLT 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03402 404 ProSitePatterns Pectinesterase signature 2. 253 262 IPR033131 -
Mepo3g03402 404 Gene3D - 99 403 IPR012334 -
Mepo3g03402 404 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 96 399 - -
Mepo3g03402 404 FunFam Pectinesterase 99 404 - -
Mepo3g03402 404 SUPERFAMILY Pectin lyase-like 102 399 IPR011050 -
Mepo3g03402 404 Pfam Pectinesterase 106 395 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03402 Mepo-Chr3 44066284 44068854 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03402 97 399 Carbohydrate Esterase AT1G05310 55.556 2.14e-121 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03402 - - gmx:100802034 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03402 3 44066284 44068854 Mepo4g03585 4 45292630 45294730 PCT