Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03381 ATGGAAAACCCTAGTTTGCTCGGTGAGGGAGAGGGATATGTCGGCGATGTTGATGAAGCTATTGAAAATATCTCCGTTCCAAAACAGGTTGGAAAAAAACATCTCCGTTCCCCGATTTGCTTGATGATCGGGCATGAGTTGAGTGGCAAAACCACACTGCTGGATTGTATTCGAGGTACCGAAAGTGATGCTAATAATTTTCAACATTATAGGGCCACATATGTTCCTGCTAAGAATATACGTGAAAGAACTAGGAAATTAAAATCTTATGAAAAAATCAGAGTTCCTGGTTTACTATTTATTGATACTCCGGGTTTCATATCAATCACCAACTTAAGGTATCGAGGTTTAGCTCTATGTGATATTGCAATCTTGGTTGTTGACATTAATATTGGGTTACGGCCACAGACAATTGAAACACTAAATCTTTTAAAAATGTGCAAGACAAAGTTCATTGTTGCCTTGAATCAGGTTGACAGGATTTATGGATGGAAAACATGTCACAATGCTTCATTCCCCAATGCATATATGAAGCAGTCTCGTGATGCTGAAATAAGATTTTGTTCTATGCTCAATAGGACTATTTGGCAGTTCAGACAACATGGTATAGTTACAAAGATATGTTATCAAAACAAGGAAATGAGAGAAACGGTCAGCATTGTGCCAACAAGTGCTATAAGTGGTGAAGGAATCTCAGATATGTTATTACAATTGGTTATGTGGACCCAAAAAACAATGGTTGAAAAACTTACATACAGGGAAGAATTGCAGTGTATTATTTTGGATGTCAATGATTTTGAAGACCGTGGATCCACTCTCAATGTTGTTTTAGTTAATGGTGTTCTACATGAAGGAGATCAAATAGCTGTATGTGGAAGGCAGGGTACAACAATTGTTACTTCAATTCAAGCTTTACTGAAAACTCCTCCATTGATGGAACTAGGTGCTAAGGGAGACTATATCCACTGCAAAAAAGTCAAAGGTGCGAAGGCTATCAAGATCATTGCTCAGGGACTTGAAGATGCTATTGTTGGCTCTAATGTATATATGGTGAAGCTTGATGAAGATTCCAAAGAAGGAGAATTGGTGAAGGGTGATACAATGAGAATTATTGGACTCCAAAACTATATTATATTTTTGGGTCTGATAGCTGTTGTGATGTTGTTGTTGTCTTGGTTATATCTAATGTGCTAA 1194 0.3744 MENPSLLGEGEGYVGDVDEAIENISVPKQVGKKHLRSPICLMIGHELSGKTTLLDCIRGTESDANNFQHYRATYVPAKNIRERTRKLKSYEKIRVPGLLFIDTPGFISITNLRYRGLALCDIAILVVDINIGLRPQTIETLNLLKMCKTKFIVALNQVDRIYGWKTCHNASFPNAYMKQSRDAEIRFCSMLNRTIWQFRQHGIVTKICYQNKEMRETVSIVPTSAISGEGISDMLLQLVMWTQKTMVEKLTYREELQCIILDVNDFEDRGSTLNVVLVNGVLHEGDQIAVCGRQGTTIVTSIQALLKTPPLMELGAKGDYIHCKKVKGAKAIKIIAQGLEDAIVGSNVYMVKLDEDSKEGELVKGDTMRIIGLQNYIIFLGLIAVVMLLLSWLYLMC 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03381 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 295 IPR027417 -
Mepo3g03381 397 Gene3D - 29 253 IPR027417 -
Mepo3g03381 397 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 32 359 IPR015760 -
Mepo3g03381 397 NCBIfam small GTP-binding protein domain 40 173 IPR005225 GO:0005525
Mepo3g03381 397 Pfam Elongation factor Tu GTP binding domain 39 240 IPR000795 GO:0003924|GO:0005525
Mepo3g03381 397 Gene3D Translation factors 254 365 - -
Mepo3g03381 397 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 35 247 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03381 Mepo-Chr3 43885424 43889887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03381 31 356 Eukaryotic Initiation Factors Gene Family AT1G76810 58.485 1.03e-121 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03381 K03243 - mtr:25499339 729.554