Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03370 ATGGATTTTCCGTTTAACGATTTTCCCCTCGACGACGACATTCCCATCGAGTTCCGCGACTTCGACGAAAGCGCAATTCCCACCAGAGAACAACTCATGGACGCCGGAGCAGATCCCAGATTCATCAATTTAGTATTAAATGGACACTCCGACAACGAAGAAGAAGACGACGATGAAGAAGATGAAGACGATGAAGAGTATGTTCCCGATGTGCCGTCGTCTAGGGTTTCTCGATCCGACGATGAGAGAAACAAGCGCCGCAGAATTGAAGGAGCAGATGCTTTTTCGTCCTCGATTCCGATTGAAAGTGCTGATTGTAGCCAAGAGAATGAATGTAACCGTACTGATATTGATGGACTCATTTGCCCTATTTGTATGGATTCGTGGACCAATGAAGGCGATCATCACATTTGTTGTCTTCCTTGTGGACACATTTATGGCATGTCATGCGTCAGAAAATGGCTTCAACAGAAGAAAAATTCGGGGAAGTGTCCTCAATGTAATAGAAGATGTTCGATGAAGGATGTGAGGAAACTCTATGCTTCTAGAGTAGTTACTGTTGATGAAGAATCTCAGAAGATGATTCGGTCACTTGAGACCATATGTGCTTCTCTTGAGAGTAAGGATGGTAGGTGGCGCAAGAAAGAAGAGGGATGGATAGAGAGAGAAGCTGCATTGCTTTTTGATGTCCAGAACCTTAAGAAGAGAAACACTTATTTGGAGCAGCTGGTACTAGATATGCAGAGCAGACAATCTGAGCGCAACTATAACCCAATGACCTACGGAAAAGGATCTTCTTGCAATTTTGAATTTCAGAATGCATTTCACCTGCATGGTGCTCGTGTATTTGATATAGACACTTCTAATCAAATTGTAATAATCGCACAAAAGCCAAAAGGAATGGGTGATGTGCACAGTATAACTAAAATGAGCTTGATATCTCCATTTGAGATGCAACATATTGAACTGCCTTCATCTACAAATGGTATTAGAGACCTGCATATTTCTCCTTTTGGTAGTAAACAGGCCCTCTATGCGTCATTTGGGAAGCAATTATCAGTGCTCAGCTTCGACAGCGGCACCCCTGTTCTCAGTTATGATCTAGAGGTTCCTGCTTGGTCCTGTTCATGGGATCGCAACAGTACACATTGCGTATATGCTGGACTACAGAATGGTAAAGTCCTGGTGTTTGACATGAGACAAACTGCAGGACCCTTAAAATCTTTAGCTGGGTTGACTAGCAACCCTGTTCATAGTTTGCAGTCTCTTGCACAAACAACGGGTCTTTCTTCAGGTGTCAGAACCATTCTATCTGCATCTGCCATCGGTGCTTGTCAGTGGGACATTGATTCTGATGATCGGCCATTTATGGTTCATGGGACTGATTATCAAGGAGTTTGTATATCCCTTGCCTATTCCCCGAGCAGTGATGACACTGTTGTTTCATACCGTCCAAAGCTCAACACGTTGACGGGTGAGCTTATTGGACAAGGAGTACAGGGCTCTCATGTATTATTAAAGAGAACAGGTGGTAATAATTTTCAAAAGATGGGTTCCTCGTATGGCAATGTAAGTAAAATTCGACTACCAAGATGTGTAATTATAGACATTGCGAATCAGAATAGAATGTTTGCATCTGGAGATGAAGTTACATGTGACTTGGTCTTACAAGAGTTGCCATCTTTTAGAGTTATTCAGCGATTCAAAATGCCAGCTCAAGCCTGTGATATCAGGTACTCACCTAGTCATGGAATGCTTGGTTGTTTAAGTGAGAATTCATTGCAAATTTTCCGTACCAATCTCCCGTGA 1809 0.4273 MDFPFNDFPLDDDIPIEFRDFDESAIPTREQLMDAGADPRFINLVLNGHSDNEEEDDDEEDEDDEEYVPDVPSSRVSRSDDERNKRRRIEGADAFSSSIPIESADCSQENECNRTDIDGLICPICMDSWTNEGDHHICCLPCGHIYGMSCVRKWLQQKKNSGKCPQCNRRCSMKDVRKLYASRVVTVDEESQKMIRSLETICASLESKDGRWRKKEEGWIEREAALLFDVQNLKKRNTYLEQLVLDMQSRQSERNYNPMTYGKGSSCNFEFQNAFHLHGARVFDIDTSNQIVIIAQKPKGMGDVHSITKMSLISPFEMQHIELPSSTNGIRDLHISPFGSKQALYASFGKQLSVLSFDSGTPVLSYDLEVPAWSCSWDRNSTHCVYAGLQNGKVLVFDMRQTAGPLKSLAGLTSNPVHSLQSLAQTTGLSSGVRTILSASAIGACQWDIDSDDRPFMVHGTDYQGVCISLAYSPSSDDTVVSYRPKLNTLTGELIGQGVQGSHVLLKRTGGNNFQKMGSSYGNVSKIRLPRCVIIDIANQNRMFASGDEVTCDLVLQELPSFRVIQRFKMPAQACDIRYSPSHGMLGCLSENSLQIFRTNLP 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03370 602 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 197 IPR013083 -
Mepo3g03370 602 ProSiteProfiles Zinc finger RING-type profile. 122 168 IPR001841 -
Mepo3g03370 602 PANTHER RFWD3 PROTEIN 49 600 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Mepo3g03370 602 MobiDBLite consensus disorder prediction 49 91 - -
Mepo3g03370 602 Pfam Ring finger domain 122 168 IPR001841 -
Mepo3g03370 602 SUPERFAMILY WD40 repeat-like 272 600 IPR036322 GO:0005515
Mepo3g03370 602 Gene3D - 198 489 IPR015943 GO:0005515
Mepo3g03370 602 SUPERFAMILY RING/U-box 115 174 - -
Mepo3g03370 602 CDD mRING-C3HGC3_RFWD3 118 180 - -
Mepo3g03370 602 SMART ring_2 122 167 IPR001841 -
Mepo3g03370 602 MobiDBLite consensus disorder prediction 51 68 - -
Mepo3g03370 602 MobiDBLite consensus disorder prediction 69 91 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03370 37 169 C3H Transcription Factor Family AT5G38895 29.286 3.67e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03370 3 43798355 43803118 Mepo3g03370 3 43798355 43803118 ECH