Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03360 ATGTCAAAAGAGTCTGAAGAAATAAAAACTACTGAGCAATGGAAATGGTCTGAAATGCAAGGACTTGAGCTTATGAGTGATGATATCAATTCTTCTTCTGACCCTTTTAAAGGGAACTTGCCAACAGTAACAGAAGAAGTTGTTACTGCTACTGTTTCTGATTCTCAGAATCAAGTTCAAGTTTCAAAGGAAATGGAAGAACATAAGAAAGATGGTGGTAGTAAGGAGAAGGTTAAGAGTGCTCCGTCTGTTGGGTTTGGAGAGTTATTCAGATTTGCTGATGGGTTGGATTATATTTTAATGACAATTGGAACTGTTGGAGCAATTGTTCATGGTTGTTCTTTGCCTCTTTTTCTTAGATTCTTTGCTGATCTTGTTAACTCTTTTGGTTCCAATGCTAATAATTTGGATAAGATGACACAAGAAGTTGTTAAGTATGCATTTTACTTCCTTGTGGTGGGTGCTGCTATTTGGGCTTCTTCTTGGGCAGAGATTTCTTGTTGGATGTGGACTGGAGAACGACAGTCGACCAAGATGAGGATCAAGTATCTAGAAGCTGCATTGAAACAAGATATTGAATTCTTTGACACCGAGGTTCGAACTTCGGATGTTGTTTTTGCAATCAACACTGATGCTGTTATGGTTCAGGATGCCATTAGTGAGAAGCTTGGAAATTTCATTCACTACATGGCTACTTTTGTTTCTGGTTTTGTTGTTGGATTCACTGCTGTTTGGCAATTGGCTTTGGTTACCCTTGCTGTTGTTCCTATGATAGCTGTAATTGGAGGCATTCACACAACTACTTTGGCTAAACTCTCTAGTAAGAGCCAAGAAGCTCTTTCTCAAGCTGGCAACATTGTAGAACAGACGGTTGTGCAAATCCGAGTAGTGCTTGCATTCGTTGGGGAGTCGCGAGCACTTCAAGGCTACTCATCGGCCTTGAAGGTCGCTCAGAAGCTTGGCTACAAAACTGGATTAGCAAAAGGAATGGGGTTAGGTGCAACTTACTTTGTTGTTTTCTGCTGTTACGCGCTTCTTCTGTGGTACGGAGGCTATCTTGTAAGGCATCACGAAACCAATGGAGGACTTGCCATCGCAACCATGTTTGCCGTCATGATTGGTGGAATAGGTTTGGGGCAATCTGCACCGAGCATGGCTGCATTTACAAAGGCTAGAGTTGCGGCTGCTAAGATTTTCCGGATAATTGATCACCAGCCTGGTATAGATAGAAACAGTGAATCTGGATTGGAATTAGAGACAGTTACTGGACTTGTTGAACTGAAAAATGTGGACTTCTCCTATCCATCAAGACCTGAAGTTCTGATCCTCAATGATTTCTCCTTGAGTGTTCCTGCCGGAAAGACCATAGCTTTAGTTGGTAGCAGCGGTTCTGGCAAGAGCACCGTTGTTTCTCTTATTGAGAGATTCTATGATCCAACTTCAGGACAAGTAATGCTAGATGGGCATGACATTAAAACTTTGAAGCTTAAATGGTTGAGGCAACAAATAGGACTGGTGAGTCAAGAACCTGCTTTGTTTGCCACCACGATTCGAGAAAACATACTCTTGGGAAGGCCTGATGCAAACCAGGTTGAGATTGAAGAAGCTGCTAGGGTTGCTAATGCTCATTCCTTCATCATCAAACTTCCTGAAGGCTATGAAACTCAGGTAGGAGAAAGAGGACTACAACTTTCTGGAGGGCAAAAACAAAGAATAGCAATAGCAAGGGCAATGCTAAAAAATCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTGGACTCTGAATCCGAAAAGTTGGTGCAAGAAGCACTTGACCGGTTCATGATTGGCAGGACAACTCTTGTAATTGCTCATCGCCTCTCCACAATTCGCAAAGCTGATCTCGTAGCCGTGATTCAGCAAGGAAGTGTTTTTGAAATTGGAACTCATGATGAGCTCTTCTCCAAAGGTGAAAATGGAGTCTATGCCAAGCTTATTAAGATGCAGGAGGTTGCCCATGAAACTGCTATGAATAATGCTAGAAAGAGTAGTGCAAGGCCTTCAAGTGCAAGAAACTCGGTTAGCTCCCCGATAATTGCTAGGAATTCTTCTTATGGCCGGTCACCATATTCGCGTAGATTGTCTGATTTCTCTACATCAGATTTTAGTTTGTCAGTTGATGCATCTCATCCAAATTACAAGCATGAAAAGCTTGCCTTCAAAGATCAAGCCGGTTCCTTCTGGAGACTAGTTAAAATGAACTCTCCTGAATGGCTCTATGCTTTACTTGGCTCAATCGGTTCAATTGTTTGTGGATCGCTTAGTGCTTTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTCTACTACAATCCAGACCACAAACACATGATCCGAGAAATAGATAAGTATTGCTACTTGTTGATTGGTCTTTCATCAACTGCACTTATCTTCAATACATTGCAACATTTTTTCTGGGATATTGTCGGGGAAAATCTTACGAAACGTGTGAGGGAGAAAATGCTGACGGCAGTGCTTAAGAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGAATTTCTGCAAGGCTTGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGAATTTCGGTAATTGTGCAGAATACTGCACTTATGCTTGTTGCTTGTACTGCAGGCTTTGTGTTGCAGTGGCGTCTTGCCCTTGTCCTCATTGCTGTATTTCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTAGAAGCTGCTCATGCCAAGGCCACACAACTAGCTGGGGAGGCTATAGCCAATGTAAGAACTGTTGCAGCCTTCAATTCAGAATCGAAAATTGTTCGCCTTTTCGCCTCCAACCTTGAAACTCCACTACAAAGGTGCTTTTGGAAGGGACAGATTTCCGGAAGCGGATATGGAATAGCTCAGTTTGCACTTTATGCTTCTTATGCACTCGGTCTTTGGTACGCTTCTTGGCTAGTGAAACATGGAATATCTGACTTCTCTAAAACAATCCGAGTTTTCATGGTCCTCATGGTCTCTGCCAATGGCGCTGCTGAGACTTTAACATTGGCTCCTGATTTCATCAAGGGAGGTAGAGCCATGAGATCAGTCTTCGATCTCCTCGACCGTCAAACCGAAATTGAACCAGATGATCAAGATGCTACTCCTGTTCCTGACCGTCTTCGCGGTGAAGTTGAACTTAAGCATGTGGATTTCTCGTATCCCACTAGACCAGATATGCCGGTTTTTCGTGACCTTAATCTTCGTATCCGAGCTGGCAAAACTCTTGCCCTTGTTGGACCTAGTGGCTGCGGTAAGAGCTCGGTGATTGCACTTATACAGAGATTCTATGATCCAACGTCTGGCCGGATAATGATTGATGGAAAAGACATCAGAAAATATAACCTCAAGTCCTTAAGAAGACACATTTCTGTGGTACCTCAAGAGCCATGCCTATTTGCTACTACTATTTATGAAAACATTGCATATGGTCATGACTCAGCAACTGAAGCTGAAATAATCGAAGCAGCAACACTTGCTAATGCTCACAAGTTCATATCTTCTCTACCGGACGGATACAAAACATTTGTAGGGGAGAGAGGCGTTCAACTCTCCGGGGGACAAAAACAAAGAATAGCAGTTGCTCGCGCTTTTTTGAGGAAAGCCGAGCTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGCTGAATCAGAGAGATCAGTTCAAGAGGCGCTAGACCGCGCTTCAACGGGAAAAACAACCATAATTGTTGCACATAGGCTATCAACTATCAGGAATGCCAATGTGATTGCTGTGATTGATGATGGTAAAGTAGCTGAGCAAGGTTCACATTCACAGTTGATGAAAAATCATCAGGATGGGATATATGCGCGCATGATTCAATTACAAAGGTTTACACACAACAAGGTAATTGGTATGGCATCTGGTTCAAGTTCTTCAACATGA 4014 0.4278 MSKESEEIKTTEQWKWSEMQGLELMSDDINSSSDPFKGNLPTVTEEVVTATVSDSQNQVQVSKEMEEHKKDGGSKEKVKSAPSVGFGELFRFADGLDYILMTIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALKQDIEFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGESRALQGYSSALKVAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHETNGGLAIATMFAVMIGGIGLGQSAPSMAAFTKARVAAAKIFRIIDHQPGIDRNSESGLELETVTGLVELKNVDFSYPSRPEVLILNDFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGHDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVFEIGTHDELFSKGENGVYAKLIKMQEVAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSVDASHPNYKHEKLAFKDQAGSFWRLVKMNSPEWLYALLGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHKHMIREIDKYCYLLIGLSSTALIFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSESKIVRLFASNLETPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRQTEIEPDDQDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLNLRIRAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRIMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFLRKAELMLLDEATSALDAESERSVQEALDRASTGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSQLMKNHQDGIYARMIQLQRFTHNKVIGMASGSSSST 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03360 1337 CDD ABC_6TM_Pgp_ABCB1_D2_like 747 1062 - -
Mepo3g03360 1337 Gene3D ABC transporter type 1, transmembrane domain 738 1045 IPR036640 GO:0005524|GO:0016020
Mepo3g03360 1337 MobiDBLite consensus disorder prediction 53 79 - -
Mepo3g03360 1337 MobiDBLite consensus disorder prediction 61 77 - -
Mepo3g03360 1337 FunFam ABC transporter B family member 1 88 423 - -
Mepo3g03360 1337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 416 664 IPR027417 -
Mepo3g03360 1337 FunFam ABC transporter B family member 1 736 1045 - -
Mepo3g03360 1337 SUPERFAMILY ABC transporter transmembrane region 89 409 IPR036640 GO:0005524|GO:0016020
Mepo3g03360 1337 Pfam ABC transporter transmembrane region 759 1027 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g03360 1337 Pfam ABC transporter transmembrane region 101 374 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g03360 1337 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 757 1044 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g03360 1337 FunFam ABC transporter B family member 1 1070 1320 - -
Mepo3g03360 1337 Pfam ABC transporter 1099 1247 IPR003439 GO:0005524
Mepo3g03360 1337 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 103 390 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g03360 1337 FunFam ABC transporter B family member 19 1046 1068 - -
Mepo3g03360 1337 CDD ABC_MTABC3_MDL1_MDL2 425 664 - -
Mepo3g03360 1337 PANTHER ABC TRANSPORTER B FAMILY 63 810 IPR039421 -
Mepo3g03360 1337 Gene3D ABC transporter type 1, transmembrane domain 88 677 IPR036640 GO:0005524|GO:0016020
Mepo3g03360 1337 ProSitePatterns ABC transporters family signature. 564 578 IPR017871 GO:0005524|GO:0016887
Mepo3g03360 1337 SMART AAA_5 452 638 IPR003593 GO:0016887
Mepo3g03360 1337 SMART AAA_5 1107 1299 IPR003593 GO:0016887
Mepo3g03360 1337 Gene3D ABC transporter type 1, transmembrane domain 1046 1321 IPR036640 GO:0005524|GO:0016020
Mepo3g03360 1337 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 425 661 IPR003439 GO:0005524
Mepo3g03360 1337 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1080 1316 IPR003439 GO:0005524
Mepo3g03360 1337 SUPERFAMILY ABC transporter transmembrane region 744 1064 IPR036640 GO:0005524|GO:0016020
Mepo3g03360 1337 ProSitePatterns ABC transporters family signature. 1219 1233 IPR017871 GO:0005524|GO:0016887
Mepo3g03360 1337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1071 1319 IPR027417 -
Mepo3g03360 1337 FunFam ABC transporter B family member 1 415 665 - -
Mepo3g03360 1337 CDD ABC_MTABC3_MDL1_MDL2 1080 1319 - -
Mepo3g03360 1337 CDD ABC_6TM_Pgp_ABCB1_D1_like 101 398 - -
Mepo3g03360 1337 Pfam ABC transporter 443 592 IPR003439 GO:0005524
Mepo3g03360 1337 Gene3D - 1069 1320 IPR027417 -
Mepo3g03360 1337 Gene3D - 415 665 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03360 Mepo-Chr3 43676922 43683347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03360 103 681 Calmodulin-binding Proteins AT2G36910 39.243 1.87e-119 402