Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo3g03360 | ATGTCAAAAGAGTCTGAAGAAATAAAAACTACTGAGCAATGGAAATGGTCTGAAATGCAAGGACTTGAGCTTATGAGTGATGATATCAATTCTTCTTCTGACCCTTTTAAAGGGAACTTGCCAACAGTAACAGAAGAAGTTGTTACTGCTACTGTTTCTGATTCTCAGAATCAAGTTCAAGTTTCAAAGGAAATGGAAGAACATAAGAAAGATGGTGGTAGTAAGGAGAAGGTTAAGAGTGCTCCGTCTGTTGGGTTTGGAGAGTTATTCAGATTTGCTGATGGGTTGGATTATATTTTAATGACAATTGGAACTGTTGGAGCAATTGTTCATGGTTGTTCTTTGCCTCTTTTTCTTAGATTCTTTGCTGATCTTGTTAACTCTTTTGGTTCCAATGCTAATAATTTGGATAAGATGACACAAGAAGTTGTTAAGTATGCATTTTACTTCCTTGTGGTGGGTGCTGCTATTTGGGCTTCTTCTTGGGCAGAGATTTCTTGTTGGATGTGGACTGGAGAACGACAGTCGACCAAGATGAGGATCAAGTATCTAGAAGCTGCATTGAAACAAGATATTGAATTCTTTGACACCGAGGTTCGAACTTCGGATGTTGTTTTTGCAATCAACACTGATGCTGTTATGGTTCAGGATGCCATTAGTGAGAAGCTTGGAAATTTCATTCACTACATGGCTACTTTTGTTTCTGGTTTTGTTGTTGGATTCACTGCTGTTTGGCAATTGGCTTTGGTTACCCTTGCTGTTGTTCCTATGATAGCTGTAATTGGAGGCATTCACACAACTACTTTGGCTAAACTCTCTAGTAAGAGCCAAGAAGCTCTTTCTCAAGCTGGCAACATTGTAGAACAGACGGTTGTGCAAATCCGAGTAGTGCTTGCATTCGTTGGGGAGTCGCGAGCACTTCAAGGCTACTCATCGGCCTTGAAGGTCGCTCAGAAGCTTGGCTACAAAACTGGATTAGCAAAAGGAATGGGGTTAGGTGCAACTTACTTTGTTGTTTTCTGCTGTTACGCGCTTCTTCTGTGGTACGGAGGCTATCTTGTAAGGCATCACGAAACCAATGGAGGACTTGCCATCGCAACCATGTTTGCCGTCATGATTGGTGGAATAGGTTTGGGGCAATCTGCACCGAGCATGGCTGCATTTACAAAGGCTAGAGTTGCGGCTGCTAAGATTTTCCGGATAATTGATCACCAGCCTGGTATAGATAGAAACAGTGAATCTGGATTGGAATTAGAGACAGTTACTGGACTTGTTGAACTGAAAAATGTGGACTTCTCCTATCCATCAAGACCTGAAGTTCTGATCCTCAATGATTTCTCCTTGAGTGTTCCTGCCGGAAAGACCATAGCTTTAGTTGGTAGCAGCGGTTCTGGCAAGAGCACCGTTGTTTCTCTTATTGAGAGATTCTATGATCCAACTTCAGGACAAGTAATGCTAGATGGGCATGACATTAAAACTTTGAAGCTTAAATGGTTGAGGCAACAAATAGGACTGGTGAGTCAAGAACCTGCTTTGTTTGCCACCACGATTCGAGAAAACATACTCTTGGGAAGGCCTGATGCAAACCAGGTTGAGATTGAAGAAGCTGCTAGGGTTGCTAATGCTCATTCCTTCATCATCAAACTTCCTGAAGGCTATGAAACTCAGGTAGGAGAAAGAGGACTACAACTTTCTGGAGGGCAAAAACAAAGAATAGCAATAGCAAGGGCAATGCTAAAAAATCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTGGACTCTGAATCCGAAAAGTTGGTGCAAGAAGCACTTGACCGGTTCATGATTGGCAGGACAACTCTTGTAATTGCTCATCGCCTCTCCACAATTCGCAAAGCTGATCTCGTAGCCGTGATTCAGCAAGGAAGTGTTTTTGAAATTGGAACTCATGATGAGCTCTTCTCCAAAGGTGAAAATGGAGTCTATGCCAAGCTTATTAAGATGCAGGAGGTTGCCCATGAAACTGCTATGAATAATGCTAGAAAGAGTAGTGCAAGGCCTTCAAGTGCAAGAAACTCGGTTAGCTCCCCGATAATTGCTAGGAATTCTTCTTATGGCCGGTCACCATATTCGCGTAGATTGTCTGATTTCTCTACATCAGATTTTAGTTTGTCAGTTGATGCATCTCATCCAAATTACAAGCATGAAAAGCTTGCCTTCAAAGATCAAGCCGGTTCCTTCTGGAGACTAGTTAAAATGAACTCTCCTGAATGGCTCTATGCTTTACTTGGCTCAATCGGTTCAATTGTTTGTGGATCGCTTAGTGCTTTCTTTGCTTATGTTCTTAGTGCTGTCCTCAGTGTCTACTACAATCCAGACCACAAACACATGATCCGAGAAATAGATAAGTATTGCTACTTGTTGATTGGTCTTTCATCAACTGCACTTATCTTCAATACATTGCAACATTTTTTCTGGGATATTGTCGGGGAAAATCTTACGAAACGTGTGAGGGAGAAAATGCTGACGGCAGTGCTTAAGAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGAATTTCTGCAAGGCTTGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGAATTTCGGTAATTGTGCAGAATACTGCACTTATGCTTGTTGCTTGTACTGCAGGCTTTGTGTTGCAGTGGCGTCTTGCCCTTGTCCTCATTGCTGTATTTCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTAGAAGCTGCTCATGCCAAGGCCACACAACTAGCTGGGGAGGCTATAGCCAATGTAAGAACTGTTGCAGCCTTCAATTCAGAATCGAAAATTGTTCGCCTTTTCGCCTCCAACCTTGAAACTCCACTACAAAGGTGCTTTTGGAAGGGACAGATTTCCGGAAGCGGATATGGAATAGCTCAGTTTGCACTTTATGCTTCTTATGCACTCGGTCTTTGGTACGCTTCTTGGCTAGTGAAACATGGAATATCTGACTTCTCTAAAACAATCCGAGTTTTCATGGTCCTCATGGTCTCTGCCAATGGCGCTGCTGAGACTTTAACATTGGCTCCTGATTTCATCAAGGGAGGTAGAGCCATGAGATCAGTCTTCGATCTCCTCGACCGTCAAACCGAAATTGAACCAGATGATCAAGATGCTACTCCTGTTCCTGACCGTCTTCGCGGTGAAGTTGAACTTAAGCATGTGGATTTCTCGTATCCCACTAGACCAGATATGCCGGTTTTTCGTGACCTTAATCTTCGTATCCGAGCTGGCAAAACTCTTGCCCTTGTTGGACCTAGTGGCTGCGGTAAGAGCTCGGTGATTGCACTTATACAGAGATTCTATGATCCAACGTCTGGCCGGATAATGATTGATGGAAAAGACATCAGAAAATATAACCTCAAGTCCTTAAGAAGACACATTTCTGTGGTACCTCAAGAGCCATGCCTATTTGCTACTACTATTTATGAAAACATTGCATATGGTCATGACTCAGCAACTGAAGCTGAAATAATCGAAGCAGCAACACTTGCTAATGCTCACAAGTTCATATCTTCTCTACCGGACGGATACAAAACATTTGTAGGGGAGAGAGGCGTTCAACTCTCCGGGGGACAAAAACAAAGAATAGCAGTTGCTCGCGCTTTTTTGAGGAAAGCCGAGCTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGCTGAATCAGAGAGATCAGTTCAAGAGGCGCTAGACCGCGCTTCAACGGGAAAAACAACCATAATTGTTGCACATAGGCTATCAACTATCAGGAATGCCAATGTGATTGCTGTGATTGATGATGGTAAAGTAGCTGAGCAAGGTTCACATTCACAGTTGATGAAAAATCATCAGGATGGGATATATGCGCGCATGATTCAATTACAAAGGTTTACACACAACAAGGTAATTGGTATGGCATCTGGTTCAAGTTCTTCAACATGA | 4014 | 0.4278 | MSKESEEIKTTEQWKWSEMQGLELMSDDINSSSDPFKGNLPTVTEEVVTATVSDSQNQVQVSKEMEEHKKDGGSKEKVKSAPSVGFGELFRFADGLDYILMTIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALKQDIEFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGESRALQGYSSALKVAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHETNGGLAIATMFAVMIGGIGLGQSAPSMAAFTKARVAAAKIFRIIDHQPGIDRNSESGLELETVTGLVELKNVDFSYPSRPEVLILNDFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGHDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVFEIGTHDELFSKGENGVYAKLIKMQEVAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSVDASHPNYKHEKLAFKDQAGSFWRLVKMNSPEWLYALLGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHKHMIREIDKYCYLLIGLSSTALIFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSESKIVRLFASNLETPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRQTEIEPDDQDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDLNLRIRAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRIMIDGKDIRKYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFLRKAELMLLDEATSALDAESERSVQEALDRASTGKTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSQLMKNHQDGIYARMIQLQRFTHNKVIGMASGSSSST | 1337 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo3g03360 | 1337 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 747 | 1062 | - | - | |
Mepo3g03360 | 1337 | Gene3D | ABC transporter type 1, transmembrane domain | 738 | 1045 | IPR036640 | GO:0005524|GO:0016020 | |
Mepo3g03360 | 1337 | MobiDBLite | consensus disorder prediction | 53 | 79 | - | - | |
Mepo3g03360 | 1337 | MobiDBLite | consensus disorder prediction | 61 | 77 | - | - | |
Mepo3g03360 | 1337 | FunFam | ABC transporter B family member 1 | 88 | 423 | - | - | |
Mepo3g03360 | 1337 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 416 | 664 | IPR027417 | - | |
Mepo3g03360 | 1337 | FunFam | ABC transporter B family member 1 | 736 | 1045 | - | - | |
Mepo3g03360 | 1337 | SUPERFAMILY | ABC transporter transmembrane region | 89 | 409 | IPR036640 | GO:0005524|GO:0016020 | |
Mepo3g03360 | 1337 | Pfam | ABC transporter transmembrane region | 759 | 1027 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mepo3g03360 | 1337 | Pfam | ABC transporter transmembrane region | 101 | 374 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mepo3g03360 | 1337 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 757 | 1044 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mepo3g03360 | 1337 | FunFam | ABC transporter B family member 1 | 1070 | 1320 | - | - | |
Mepo3g03360 | 1337 | Pfam | ABC transporter | 1099 | 1247 | IPR003439 | GO:0005524 | |
Mepo3g03360 | 1337 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 103 | 390 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mepo3g03360 | 1337 | FunFam | ABC transporter B family member 19 | 1046 | 1068 | - | - | |
Mepo3g03360 | 1337 | CDD | ABC_MTABC3_MDL1_MDL2 | 425 | 664 | - | - | |
Mepo3g03360 | 1337 | PANTHER | ABC TRANSPORTER B FAMILY | 63 | 810 | IPR039421 | - | |
Mepo3g03360 | 1337 | Gene3D | ABC transporter type 1, transmembrane domain | 88 | 677 | IPR036640 | GO:0005524|GO:0016020 | |
Mepo3g03360 | 1337 | ProSitePatterns | ABC transporters family signature. | 564 | 578 | IPR017871 | GO:0005524|GO:0016887 | |
Mepo3g03360 | 1337 | SMART | AAA_5 | 452 | 638 | IPR003593 | GO:0016887 | |
Mepo3g03360 | 1337 | SMART | AAA_5 | 1107 | 1299 | IPR003593 | GO:0016887 | |
Mepo3g03360 | 1337 | Gene3D | ABC transporter type 1, transmembrane domain | 1046 | 1321 | IPR036640 | GO:0005524|GO:0016020 | |
Mepo3g03360 | 1337 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 425 | 661 | IPR003439 | GO:0005524 | |
Mepo3g03360 | 1337 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1080 | 1316 | IPR003439 | GO:0005524 | |
Mepo3g03360 | 1337 | SUPERFAMILY | ABC transporter transmembrane region | 744 | 1064 | IPR036640 | GO:0005524|GO:0016020 | |
Mepo3g03360 | 1337 | ProSitePatterns | ABC transporters family signature. | 1219 | 1233 | IPR017871 | GO:0005524|GO:0016887 | |
Mepo3g03360 | 1337 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1071 | 1319 | IPR027417 | - | |
Mepo3g03360 | 1337 | FunFam | ABC transporter B family member 1 | 415 | 665 | - | - | |
Mepo3g03360 | 1337 | CDD | ABC_MTABC3_MDL1_MDL2 | 1080 | 1319 | - | - | |
Mepo3g03360 | 1337 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 101 | 398 | - | - | |
Mepo3g03360 | 1337 | Pfam | ABC transporter | 443 | 592 | IPR003439 | GO:0005524 | |
Mepo3g03360 | 1337 | Gene3D | - | 1069 | 1320 | IPR027417 | - | |
Mepo3g03360 | 1337 | Gene3D | - | 415 | 665 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo3g03360 | Mepo-Chr3 | 43676922 | 43683347 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo3g03360 | 103 | 681 | Calmodulin-binding Proteins | AT2G36910 | 39.243 | 1.87e-119 | 402 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo3g03360 | K05658 | - | gmx:100814667 | 2331.21 |