Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03355 ATGGAGGTTACAAAGAAGTTGAAGCTAAAGCATTTGATATCAAAGGTACTAAAGGGTCTTCATTTCTTGGAAATCAGTAAAGCATATACAACAAGAGCTGATTATGTGAGAATCAGAGACATTGATGATGATGATGATGATAAAGAGAGCGAAGCAGCAACAACAGTACCTGAAGGGTATTTTGCTGTTATTGCAATGCAAGGTGAAGAAACAAAGAGATTTGTTCTTGAGTTGGATTACTTGAGAAATCCTCATTTCATGAAACTATTGGAGCAAGCTAAGGATGAGTATGGTTATCAACAAAAGGGTGCTATTGCATTGCCATGTAAGCCTCAAGAACTTCAAAAGATTATAGAGAATCGACATAGTGATGCTTTTTAA 381 0.3596 MEVTKKLKLKHLISKVLKGLHFLEISKAYTTRADYVRIRDIDDDDDDKESEAATTVPEGYFAVIAMQGEETKRFVLELDYLRNPHFMKLLEQAKDEYGYQQKGAIALPCKPQELQKIIENRHSDAF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03355 126 Pfam Auxin responsive protein 40 118 IPR003676 GO:0009733
Mepo3g03355 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 44 117 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03355 Mepo-Chr3 43605367 43606198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03355 21 124 Calmodulin-binding Proteins AT3G43120 33.645 2.30e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03355 - K14488 gmx:102661602 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03355 3 43605367 43606198 Mepo3g03355 3 43605367 43606198 ECH
Mepo3g03355 3 43605367 43606198 Mepo4g02542 4 33883711 33884007 PCT