Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03349 ATGCAACTAGTCTGGTCTGGTATCATGAAGTGTTTTCCATTCCACTCTAGCGATAAGAAAGATGAACCAAAAGGCTTGCAATCCGCGTCTGGCCGTTCTGACAGTTCCACATATGGTAGAAGATGTGGTTCTGAATTGAATTCTCAGGATGTCTCGGATAGTGGCAGCGTGGAATCCCTCGGGAGGAATGCACCTCCTAATTTGTCCCAAAGACCTAGTAATCTTAGAGTGTTTAATGTCTCTGAACTGAAATCAGCCACGAAGAATTTCAGTCGATCGGTTATGCTTGGAGAGGGTGGGTTCGGGTGTGTTTATCAGGGAGTAATTAGAAGTGTAGATGATCCATCTAGAAGAATTGAGGTTGCAGTTAAACAACTTAGTAAGAGAGGAGTGCAGGGGCATAGGGAATGGGTGACAGAAGTGAATGTTCTGGGAATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGATATTGTGCCGATGATGATGAAAGAGGAATCCAACGGCTTCTGATTTATGAATACATGCCAAACAGAAGTGTGGAACACCATTTATCTCACCGAGCAGAGACTCCTCTCCCATGGAATAGGAGATTAAAAATAGCACACGACGCAGCTCGTGGATTGACATACCTGCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGATGATCAGTGGAATGCAAAGCTATCAGACTTTGGGTTAGCGAGACTGGGACCATCGGATGGACTAACTCATGTTTCAACAGCGGTTGTAGGAACAATGGGGTATGCAGCTCCTGAATATCTCCAAACCGGACGCCTTACATCAAAGAATGATGTATGGAGCTACGGTGTTTTCCTTTATGAACTCATTACTGGCAGGCGCCCTTTAGATCGAAATCGCCCCAAGGGTGAACAAAAGTTATTGGAATGGATAAAGCCATACCTATCAGATACAAAGAAATTTCAACTGATATTGGATCCAAGACTTGATAAGAAACAAGTTATCAGATCAGCACAGAGACTTGCTACGGTAGCTAACCGATGTTTAGTTAAAAACCCGAAGAATCGGCCAAAGATGAGTGAGGTTTTGGAAATGGTGAATGGAATAGTAGAATCATCATCCGACACTAATTCACAACTACCCTTGAAGAATATTTCGAGAATAGGAGCTTCTCGTGAAACTGAAATGAAGAACACAAAGAAGCGGACCATGAATCAGAAGTCTAGAGAAAGTAATTGGTTCTTTAGGATGTGGAGACCAAAGCTTGTAAGAACATGA 1293 0.4238 MQLVWSGIMKCFPFHSSDKKDEPKGLQSASGRSDSSTYGRRCGSELNSQDVSDSGSVESLGRNAPPNLSQRPSNLRVFNVSELKSATKNFSRSVMLGEGGFGCVYQGVIRSVDDPSRRIEVAVKQLSKRGVQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRAETPLPWNRRLKIAHDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYLQTGRLTSKNDVWSYGVFLYELITGRRPLDRNRPKGEQKLLEWIKPYLSDTKKFQLILDPRLDKKQVIRSAQRLATVANRCLVKNPKNRPKMSEVLEMVNGIVESSSDTNSQLPLKNISRIGASRETEMKNTKKRTMNQKSRESNWFFRMWRPKLVRT 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03349 430 MobiDBLite consensus disorder prediction 18 72 - -
Mepo3g03349 430 FunFam Serine/threonine-protein kinase BIK1 59 175 - -
Mepo3g03349 430 MobiDBLite consensus disorder prediction 28 72 - -
Mepo3g03349 430 Pfam Protein kinase domain 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03349 430 Gene3D Phosphorylase Kinase; domain 1 63 175 - -
Mepo3g03349 430 PANTHER OS01G0588500 PROTEIN-RELATED 48 373 - -
Mepo3g03349 430 CDD STKc_IRAK 96 374 - -
Mepo3g03349 430 ProSitePatterns Protein kinases ATP-binding region signature. 96 124 IPR017441 GO:0005524
Mepo3g03349 430 Gene3D Transferase(Phosphotransferase) domain 1 176 395 - -
Mepo3g03349 430 ProSiteProfiles Protein kinase domain profile. 90 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03349 430 SUPERFAMILY Protein kinase-like (PK-like) 67 371 IPR011009 -
Mepo3g03349 430 FunFam Serine/threonine-protein kinase PCRK2 176 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03349 Mepo-Chr3 43551502 43555012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03349 9 386 Glycoside Hydrolase AT3G07070 40.838 4.08e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo3g03349 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03349 - - gmx:100813060 723.776