Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03343 ATGACAACTAGGAAGAGGAATCGTGTTACCGATGATGGAGGGAGTTCCTTTTCAAGGTGTGTCAAGAAATTGGCTGAAGAATACAAAGGAAAAACAAAAGTGGATCCTCATGGGAAAAATGGAAAAGGAGATAGAGATATTGTATGTGACAAGTGTTTGCTCGAAGGAACACTCTTGTTCTGTTGTGGTAAAGGATGTCAAAGGAGGTATCACCCGTCTTGTTTGGATCCTCTTCTCAAATTTCTTCCTATAGGGTTTTGGCATTGCCTTTGGTGTGTTGAGAAAAAAATAAAGCTTGGTGTGCATTCTGTTTCTAAAGGGGTAGAATCCATATTGGATTCCCGAGAAGTCGTTTCAAAAGATAACGTGATTCAAAGGGAGTACTTTGTCAAGTATCAGGACCTCGCTCATGCTCACAACTGTTGGATTCCAGAAAAGCAAATGCTTATTGAGGCTCCAAAGCTTTTGAAAAAGTATAAGAATACAAAACAGGTTGTCCGGTGGAAAAAAGATTGGAGTATACCTCACCGGTTGCTGCTAAAAAGGAAAATTATATTGTCAAAGAAAAATGCTCACCTTTTTGATGGGAATGATGACAATGATTCAGTTTGCCAATATGAATGGCTTGTGAAATGGACTGGTCTTGGTTATGATCATGTTACATGGGAGTTAGACGACGCTTCCTTTATGACTTCATCTAAAGGCAAGGAACTCATGGACAATTATGAAAGTCGTCACAAGAAATCAGATGGACCGTCAACTCCTTTTGAAGCTAATGAGGAGAGTAAAGTTTCCTTTACCGAATTATTAGAGCTATCATCTGGAGATTCACCAGGATTGTATAACCAGCATTTGAGTTATGTGAACAGGCTGCGCATGCATTGGCACAAAGGTCAGAGTGCTGTTATTGTTGATGATCAAATTGACCAGGAGCGGGTTAGGAAGATGATTTTGTTTATATTATCGTTGAGTTGCGATGTGAAAAAGCCTTTTCTCATCATCTCAACTTCTACCGGCCTCTCTGCATGGGAAACTGAATTCTTACATTTGGCACCATCTGCCAATCTTGTAGTTTACAAGGGAAAGGAAGATGTACGCCGTAGAATCAGGGTATTAGATTTTTATAATGAAGATGGTGGTATTTTATTTCAAATATTACTATCATCATCTGATAGTATCAGTGAGGACTTACATGCTCTAAGATGCATTCCATGGGAAGCAATAGTAATTGATGAATGCCAGCGACCCATGATTTTAAGACACATTGACAATTTCAATATTCTAGCAGCTGACATAAGAAGGCTTCTTCTCGTTAGTGGACAAATCAAGGAAGATCGAGATTATATCAAATTGCTTTCATTCCTTAAGTCTGGACATGATGAGTTACATTTCTCATCTGCAAGCATCTCCAATTTGCAGAGTGAATTGGAACAATATACTGTATTGAAGTGCAATTCTGTCTCCAGCAGGTTTATAGAGTATTGGGTTCCTGCCCATTTTTCCAGTATGCAGCTTAAGCAGTATTGTTCAATGCTGCTTTCAAACTCAATGTTGTTATGCTCTGGCCAAAGGTCTGACTCTGTTGGTGCCCTCCGTGAGCTTATCATCTCAACAAAGAAGTGCTGCAACCATCCTTATCTCCTCAACCCGTCACTGAATAATTTAGTCACTAGAGGTCTGCCTGTTGAAGAGCATTTTGATATTGGAATAAAAGCAAGTGGAAAATTGCAACTTCTTGAAAAGATCCTTTTTGAAGCTAAAAGTCGTAAGCTAAGAGTGATCATATTATTTCAGTCTAGTTGTGGTTCTAGATCAATTGGAGATATTTTGGACGATGTTCTCTGTCATAAATTTGGAGAAGATTGCTATGTGCGATATTGCAAGGATTACATTCCTTCAAAGAATCAAGCTGCTTTGGACACATTTAATGATCGAGAAAGTGGAAAATTTGTTTTCTTGATAGAGAATCGTGCTTGTACCTCTAGCATTAAGCTCTCATCTGTGGATACTATTATATTATTTGACAGTGATTTGGACCCGCAAAATGACCTAAAATGCATACAAAAAATGTCAATCAGCTCAAACTTCAAACAGCCAACAGTTCTGAGATTGTACTCATACTTCACTGTTGAAGAAAAGGTTTTAGTGCTTGCAAAAGAGGGTATAACTCTTGACAGAAATATGCAGCTAAACCAGAGCAGTATTCACACCCTGCTTAAATGGGGTGCCTCTTATCTGTTCAGTAAGTTTGATGACTTACATAGAAGTGGCACCTCAGTCTCTGCTTCAGGCATCTCTGATCAGTCAATTCTAAATGATGTAATCTGTGAATTATCATCCAAATTGGCTTGTGATAGCGATGCCACTGATTCCCGCAGACAGTCTTTCATATCGAGAGTAAAACAGAATGATGGGGAATATGCAAGGAACATCTCACTTCTTGGAGAGAGGGAAATGATGAAATTGGGCAATGATACACATAATTTTTCCTGGAGTGATCTCCTCAAAGGAAGGAATCCTCACTGGAATTTTTTGCCTATTTCCTCTCAAAGGATTAGAAAAACAGTTGAACATTTTACTCACACAGTGAAAGGACCTGAATATGAAAATGATGCCATTATAAGGAAGAAAAGGACAGAGTCCAAGGATAATGTAGATCCTGAGGAGAGGGAAATCACCAAGGATAATATTGACCCAAAAAGAAGGAAACTGTCCAAGGAAATTGTTGATTCCAAGCATCTGAAAAAAAAGTGGATGAACAAGAAGAGTCGAAGTGCTGGTAAAAGGAAAGGCAAATTCAATGGAGCAGCTGTAATGAAGAAACAAATTCCAAAACAAAAGAAACTGCATGGCATGCCCAAGAGTACCAAACTCTTGTCAAAGCCTGATATATCTGGTCTCTGTGATGTTCTACTCTTTTCGAAAAATGTCAAGGCTGTCGCCATTAGGATTCTTGAGTATGTATTCGAAAATTACAATGTTAACTGCCGAGAAGTTTCTACAGTGCAGGCATTTGAAATATCTGTGTGTTGGATAGCAGCTTCTTTGTTGAAACACAAGATTGATAGGAAACATTCACTTGATCTTGCAAAACGGCACTTGAATTTCGATTGCAAGGAGGAAGAAGCTACCGATGTTTATCATGTACTGAAGAAGTGTGAGAAAGATTTTTCAAGCTGTTTACAAAATGAACTTTGTGTTGAGCAAAGTAATATAAATGGTGCTTCAGGCTCCTTGACACCTGAGCTGCAAGATTTGGTAGAGGAGGAGAATCAAAAGGGTTTTCAGCGTCCTCATGTTTTAAATCTTGTAAAATCTGCCACAAATGAACCTGATCTTCCAAGAAAATCTCCCACAACAGTGCTATTTTCACCAGACCAGATCTATACAGAAAACATTCATAACAAACCTTATATGGCTCATGAAATTTCTACATCTCAAAAGACCCCTGATAATTTGTCTGTGGAAATGGAAGTAGATGCTACTTCCATCGAATCTGAAGCAGATGAGAGAATAAATGCCATGAACTCGGTAGCAGCTGAAGTTTCATCCCTCAAGCACTGGGATAAAGTCCCCAATTCAAGTAATGATATCAATTACGTCAGCCCTGTTACAGGTTCTTTGGAAAGACAGAGTCACGTTGTAAATGCAGATATTACGCAATTTGATGGCAGAGTTTTTATAGATCCTGGAACTTTAATGAATCAATTGATTGACATTGACAATTCTTTGAATATCTCAACTCATCCTGCACAACTTCACAATGTCGAGACAGATACTGTAACTTGTGATAGAACTGCTGTTCCTGATGTCAGACAGCGGTACAGTATAGCGAGTCCTGTATGTGGTGTGTCAACTACTTCAGGGTTTGCTGAGTGTCCTTTACCATATATGCAACTGTCACATGCTAATTTGACGCTATTCCCACAGACATTGTCAGCTAGCCCATCATTTATGGAGGACTTATCTCGGTCAGTAATGCCTCTGGATAGATTTATAAATCATAATAGTCGAGATCATCGTTACATACACGGGTCTGAAGAAAGGTTGCAAGGACTGTATGACCCTGTGGAACTGGCTACCTCTTCCTTTGTTTCGCCTGTGACATCGCAACCCTCCAGTTATGCGCCCTGGAATGAAAATGCTATTCATGTTCCTCATGACATTACTAATCCGGAATATATGAGCAGTGATCCTTTTCAAGCTCATTATGTGACATATCAAATGCCCCATGTTGCAGACCCAGATCCACTACTAATTGAAATGGAGAGAATAAGAAAGATGAATGAAAGCGCCGTCAAGACACATGAGGAAAAAATATTGCAGCTGCAGTCTGACTACAAAAAGGAGTTTGAGACGTTATGTGAAAAACACTATATGATGCTTCAGAACGTCAATACTGCAGTAGCATTAAAGAATAAGGAACTTGAGACACAGCGTGATATCGTTCTCATGAATATGATATTAGCTGATGTTTGGGTCCGAAATGATAGTAGTTGGTAA 4503 0.3904 MTTRKRNRVTDDGGSSFSRCVKKLAEEYKGKTKVDPHGKNGKGDRDIVCDKCLLEGTLLFCCGKGCQRRYHPSCLDPLLKFLPIGFWHCLWCVEKKIKLGVHSVSKGVESILDSREVVSKDNVIQREYFVKYQDLAHAHNCWIPEKQMLIEAPKLLKKYKNTKQVVRWKKDWSIPHRLLLKRKIILSKKNAHLFDGNDDNDSVCQYEWLVKWTGLGYDHVTWELDDASFMTSSKGKELMDNYESRHKKSDGPSTPFEANEESKVSFTELLELSSGDSPGLYNQHLSYVNRLRMHWHKGQSAVIVDDQIDQERVRKMILFILSLSCDVKKPFLIISTSTGLSAWETEFLHLAPSANLVVYKGKEDVRRRIRVLDFYNEDGGILFQILLSSSDSISEDLHALRCIPWEAIVIDECQRPMILRHIDNFNILAADIRRLLLVSGQIKEDRDYIKLLSFLKSGHDELHFSSASISNLQSELEQYTVLKCNSVSSRFIEYWVPAHFSSMQLKQYCSMLLSNSMLLCSGQRSDSVGALRELIISTKKCCNHPYLLNPSLNNLVTRGLPVEEHFDIGIKASGKLQLLEKILFEAKSRKLRVIILFQSSCGSRSIGDILDDVLCHKFGEDCYVRYCKDYIPSKNQAALDTFNDRESGKFVFLIENRACTSSIKLSSVDTIILFDSDLDPQNDLKCIQKMSISSNFKQPTVLRLYSYFTVEEKVLVLAKEGITLDRNMQLNQSSIHTLLKWGASYLFSKFDDLHRSGTSVSASGISDQSILNDVICELSSKLACDSDATDSRRQSFISRVKQNDGEYARNISLLGEREMMKLGNDTHNFSWSDLLKGRNPHWNFLPISSQRIRKTVEHFTHTVKGPEYENDAIIRKKRTESKDNVDPEEREITKDNIDPKRRKLSKEIVDSKHLKKKWMNKKSRSAGKRKGKFNGAAVMKKQIPKQKKLHGMPKSTKLLSKPDISGLCDVLLFSKNVKAVAIRILEYVFENYNVNCREVSTVQAFEISVCWIAASLLKHKIDRKHSLDLAKRHLNFDCKEEEATDVYHVLKKCEKDFSSCLQNELCVEQSNINGASGSLTPELQDLVEEENQKGFQRPHVLNLVKSATNEPDLPRKSPTTVLFSPDQIYTENIHNKPYMAHEISTSQKTPDNLSVEMEVDATSIESEADERINAMNSVAAEVSSLKHWDKVPNSSNDINYVSPVTGSLERQSHVVNADITQFDGRVFIDPGTLMNQLIDIDNSLNISTHPAQLHNVETDTVTCDRTAVPDVRQRYSIASPVCGVSTTSGFAECPLPYMQLSHANLTLFPQTLSASPSFMEDLSRSVMPLDRFINHNSRDHRYIHGSEERLQGLYDPVELATSSFVSPVTSQPSSYAPWNENAIHVPHDITNPEYMSSDPFQAHYVTYQMPHVADPDPLLIEMERIRKMNESAVKTHEEKILQLQSDYKKEFETLCEKHYMMLQNVNTAVALKNKELETQRDIVLMNMILADVWVRNDSSW 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03343 1500 Gene3D - 490 725 IPR027417 -
Mepo3g03343 1500 Gene3D - 280 489 IPR038718 -
Mepo3g03343 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 728 IPR027417 -
Mepo3g03343 1500 ProSiteProfiles Chromo and chromo shadow domain profile. 106 171 IPR000953 -
Mepo3g03343 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 457 IPR027417 -
Mepo3g03343 1500 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 578 743 IPR001650 -
Mepo3g03343 1500 SMART chromo_7 171 247 IPR000953 -
Mepo3g03343 1500 SMART chromo_7 105 164 IPR000953 -
Mepo3g03343 1500 Gene3D - 107 164 - -
Mepo3g03343 1500 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 103 IPR013083 -
Mepo3g03343 1500 Gene3D - 1415 1495 - -
Mepo3g03343 1500 SUPERFAMILY Chromo domain-like 205 246 IPR016197 -
Mepo3g03343 1500 Gene3D - 165 245 - -
Mepo3g03343 1500 MobiDBLite consensus disorder prediction 880 899 - -
Mepo3g03343 1500 ProSitePatterns Zinc finger PHD-type signature. 49 92 IPR019786 -
Mepo3g03343 1500 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 66 1144 - -
Mepo3g03343 1500 CDD CD_CSD 108 160 - -
Mepo3g03343 1500 ProSiteProfiles Chromo and chromo shadow domain profile. 179 254 IPR000953 -
Mepo3g03343 1500 SMART PHD_3 48 93 IPR001965 -
Mepo3g03343 1500 Pfam Chromo (CHRromatin Organisation MOdifier) domain 108 161 IPR023780 -
Mepo3g03343 1500 SUPERFAMILY Chromo domain-like 65 163 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03343 Mepo-Chr3 43476648 43491786 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mepo3g03343 SNF2_N 9e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03343 - K11643 gmx:100813574 1559.27