Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03342 ATGCAAATCAGGTTTTTGAATGCAGGAATATTTGGAAATGGAACAGAGTCAAATCATACACTACCACACACAGCAACAAGAGCTGCCATGCTAGTGAGAATCAACACACTCCTCCAAGGCTATTCAGGAATTAGATTTGAAATCTTGGAAGCCATCACTAAGCTCCTTAACAACAACGTCACTCCATGTTTACCGCTTCGTGGAACAATCACAGCTTCAGGAGATTTAGTGCCTCTTTCATACATTGCTGGTTTACTCACCGGAAGACCAAATTCAAAAGCTCATGGACCATCTGGAGAAGTACTTAATGCAAAAGAAGCTTTCCAATCGGCTGGAATCAATGCTGAGTTCTTTGAATTACAACCAAAAGAAGGCCTTGCCCTTGTTAACGGAACAGCCGTTGGTTCTGGTTTAGCCTCTATTGTTCTCTTTGAGGCTAACATTTTGGCTGTGTTGTCTGAAGTTCTATCAGCTATTTTTGCTGAAGTTATGCAAGGGAAACCTGAATTTACCGATCATTTGACACACAAGTTGAAACACCACCCTGGTCAAATTGAGGCTGCTGCCATTATGGAACACATTTTGGATGGAAGTGCTTATGTCAAAGCAGATAAAAAGTTGCATGAGATGGATCCTTTGCAGAAACCAAAACAAGATAGATATGCACTTAGAACTTCACCACAATGGCTTGGTCCTTTGATTGAAGTGATTAGATTCTCAACCAAGTCAATTGAGAGAGAGATCAACTTTGTCAACGACAACCCTTTGATTGATGTTTCAAGAAACAAAGCTTTGCATGGTGGAAATTTTCAAGGAACTCCTATTGGAGTATCCATGGATAATACACGTTTGGCTCTCGCATCAATTGGAAAACTTATGTTTGCTCAATTCTCGGAGCTTGTCAATGATTTTTACAACAATGGGTTGCCTTCAAATCTTTCTGCTAGTAGAAATCCTAGCTTGGATTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCCTATTGTTCTGAGTTACAATATCTTGCAAATCCAGTTACAACCCATGTCCAGAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCTTCTAGAAAAACCTATGAAGCCATTGAGATCCTTCAACTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAATTGATTTAAGACATTTGGAGGAGAATTTGAAAAACTCAGTCAAGAACACCGTAAGTCAAGTTGCCAAAAAGACCCTTACCATGGGTGTCAATGGAGAACTTCACCCTTCAAGATTCTGTGAAAAAGACTTGTTGAAAGTGGTTGACAGGGAGCATGTATTTGCTTATATTGACGATCCTTGTAGCGCTACATACCCGTTGAGTCAAAAACTCAGACAAGTGTTGGTAGATCACGCACTAGTTAATGGAGAGAGTGAGAAGAATTTTAACACTTCAATCTTTCAAAAGATTGCGACTTTCGAGGAAGAGTTGAAAAGCCTCTTGCCAAAAGAGGTTGAAAGTGCAAGGACGGCATATGAGAATGGAAACCCAACAATCCCAAACAAGATCAATGGATGCAGATCTTATCCACTTTACAAATTTGTGAGAGAGGGGCTAGGAACTGGTTTACTAACCGGAGAAAATGTCATTTCACCCGGTGAGGAGTGCGACAAACTATTTTCAGCTATGTGTCAGGGAAAAATCATCGATCCTCTTCTTGAATGTTTGGGAGAGTGGAACGGTGCTCCTCTTCCTATTTGTTAA 1761 0.406 MQIRFLNAGIFGNGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEVLNAKEAFQSAGINAEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKADKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINFVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTMGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNFNTSIFQKIATFEEELKSLLPKEVESARTAYENGNPTIPNKINGCRSYPLYKFVREGLGTGLLTGENVISPGEECDKLFSAMCQGKIIDPLLECLGEWNGAPLPIC 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03342 586 Gene3D Fumarase/aspartase (Central domain) 133 581 - -
Mepo3g03342 586 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 68 84 IPR022313 GO:0016841
Mepo3g03342 586 FunFam Phenylalanine ammonia-lyase 133 441 - -
Mepo3g03342 586 PANTHER HISTIDINE AMMONIA-LYASE 3 586 IPR001106 -
Mepo3g03342 586 FunFam Phenylalanine ammonia-lyase 399 520 - -
Mepo3g03342 586 Gene3D - 2 132 IPR024083 -
Mepo3g03342 586 Gene3D - 399 520 IPR023144 -
Mepo3g03342 586 NCBIfam phenylalanine ammonia-lyase 3 575 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mepo3g03342 586 CDD PAL-HAL 3 396 IPR001106 -
Mepo3g03342 586 Pfam Aromatic amino acid lyase 3 408 IPR001106 -
Mepo3g03342 586 SUPERFAMILY L-aspartase-like 3 586 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03342 Mepo-Chr3 43474145 43476317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03342 3 586 Monolignol Biosynthesis Gene Families AT2G37040 83.562 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03342 K10775 - gmx:100811101 1066.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03342 3 43474145 43476317 Mepo4g03980 4 49289991 49296471 PCT