Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03341 ATGAATGATACAATGTTTTTGAATGCTGGAATATTTGGAAACGGAACTGAGTCAAGCCACACACTTCCACACACGGCAACAAGAGCTGCCATGCTAGTGAGAATCAACACACTCCTCCAAGGTTATTCAGGAATTAGATTTGAAATCTTGGAAGCCATCACCAAGCTCCTTAACAACAACGTTACTCCATGTTTACCACTTCGCGGTACAATCACTGCTTCTGGAGATTTGGTGCCTCTGTCTTATATTGCTGGGTTGCTAACTGGAAGACCAAATTCCAAAGCTCACGGACCATCTGGAGAAATACTTAATGCAAAAGAAGCTTTTCAATCGGCTGGAATCAATGCTGATTTCTTTGAATTACAACCGAAAGAAGGCCTTGCACTTGTTAACGGAACTGCTGTTGGTTCTGGTTTAGCTTCTATTGTTCTCTTTGAGGCTAACATTTTGGCTGTGTTGTCTGAAGTTCTATCAGCTATTTTTGCTGAAGTTATGCAAGGGAAACCTGAATTTACCGATCATTTGACACACAAGTTGAAACACCACCCTGGTCAAATTGAGGCTGCTGCTATTATGGAACACATTTTGGATGGAAGTGCTTATGTCAAAGCAGATAAAAAGTTGCATGAGATGGATCCTTTGCAGAAACCAAAACAAGATAGATATGCACTTAGAACTTCACCACAATGGCTTGGTCCTTTGATTGAAGTGATTAGATTCTCAACCAAGTCAATTGAGAGAGAGATCAACTCTGTCAACGACAACCCTTTGATTGATGTTTCAAGAAACAAAGCTTTGCATGGTGGAAATTTTCAAGGAACTCCTATTGGAGTATCCATGGATAATACACGTTTGGCTCTCGCATCAATTGGAAAACTTATGTTTGCTCAATTCTCGGAGCTTGTCAATGATTTTTACAACAATGGATTGCCTTCAAATCTTTCTGCTAGTAGAAATCCTAGCTTGGATTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCCTATTGTTCTGAGTTACAATATCTTGCAAATCCAGTTACAACCCATGTCCAGAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCATCTAGAAAAACCTATGAAGCCATTGAGATCCTTCAACTCATGTCTTCCACATTCTTGATTGCACTTTGCCAGGCAATTGATTTAAGACATTTGGAAGAGAACTTGAAAAACTCAGTCAAGAACACCGTAAGTCAAGTTGCCAAAAAGACCCTTACCATAGGATTCAATGGAGAACTTCATCCTTCAAGATTTTGTGAAAAAGACTTGTTGAAAGTGGTTGACAGGGAGCATGTATTTGCTTATATTGATGATCCTTGTAGCGCTACATACCCATTGAGTCAAAAACTCAGACAAGTGTTGGTAGATCACGCACTAGTTAATGGAGAGAGTGAGAAGAATTTGAACACTTCAATCTTCCAAAAGATTGCAACTTTTGAGGAAGAGTTGAAGACCCTCTTGCCAAAAGAGGTTGAAAGTGCAAGGTCTGCATATGAGAGTGGAAACCAAACAATTCCAAACAAGATCATTGGATGCAGATCTTATCCACTTTACAAATTTGTTAGAGAGGTGTTGGGAACCGGTTTACTAACAGGAGAAAATGTCATTTCACCAGGTGAGGAGTGTGACAAACTATTTTCAGCTATGTGTCAAGGAAAAATCATCGATCCTCTTCTTGAATGTTTGGGAGACTGGAACGGTGCTCCTCTTCCTATTTGTTAA 1764 0.3991 MNDTMFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEILNAKEAFQSAGINADFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKADKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTIGFNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEEELKTLLPKEVESARSAYESGNQTIPNKIIGCRSYPLYKFVREVLGTGLLTGENVISPGEECDKLFSAMCQGKIIDPLLECLGDWNGAPLPIC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03341 587 Gene3D - 400 521 IPR023144 -
Mepo3g03341 587 FunFam Phenylalanine ammonia-lyase 400 521 - -
Mepo3g03341 587 Pfam Aromatic amino acid lyase 12 409 IPR001106 -
Mepo3g03341 587 Gene3D - 2 133 IPR024083 -
Mepo3g03341 587 Gene3D Fumarase/aspartase (Central domain) 134 582 - -
Mepo3g03341 587 SUPERFAMILY L-aspartase-like 5 587 IPR008948 GO:0003824
Mepo3g03341 587 PANTHER HISTIDINE AMMONIA-LYASE 6 587 IPR001106 -
Mepo3g03341 587 FunFam Phenylalanine ammonia-lyase 134 436 - -
Mepo3g03341 587 CDD PAL-HAL 21 397 IPR001106 -
Mepo3g03341 587 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 69 85 IPR022313 GO:0016841
Mepo3g03341 587 NCBIfam phenylalanine ammonia-lyase 6 576 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03341 Mepo-Chr3 43467163 43470078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03341 6 587 Monolignol Biosynthesis Gene Families AT2G37040 83.333 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03341 K10775 - gmx:100811101 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03341 3 43467163 43470078 Mepo4g03980 4 49289991 49296471 ECH
Mepo3g03341 3 43467163 43470078 Mepo3g03341 3 43467163 43470078 ECH
Mepo4g03980 4 49289991 49296471 Mepo3g03341 3 43467163 43470078 ECH