Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03339 ATGGAGAGTATGAACAAAGGCACAGACAGTTACGGTGTCACCACCGGGTTCGGCGCCACCTCCCACCGCCGTACCAAACAAGGTGGTGCTTTGCAGAAAGAACTCATAAGGTTTTTGAATGCTGGAATATTTGGAAACGGAACTGAGTCAAGCCACACACTTCCACACACAACAACAAGAGCTGCCATGCTAGTGAGAATCAACACACTCCTCCAAGGTTATTCAGGAATCAGATTTGAAATCTTGGAAGCCATCACCAAGCTCCTTAACAACAACGTTACTCCATGTTTACCACTTCGCGGTACAATCACAGCTTCAGGAGATTTGGTTCCTCTTTCATACATTGCTGGTTTACTAACTGGAAGACCAAATTCCAAAGCTCATGGACCATCTGGAGAAATACTTAATGCAAAAGAAGCTTTTCAATCGGCTGGAATCAATGCTGATTTCTTTGAATTACAACCGAAAGAAGGCATTGCACTTGTTAACGGAACTGCTGTTGGTTCTGGTTTAGCTTCTATTGTTCTCTTTGAGGCTAACATTTTGGCTGTGTTGTCTGAAGTTCTATCAGCTATTTTTGCTGAAGTTATGCAAGGGAAACCTGAATTTACCGATCATTTGACACACAAGTTGAAACACCACCCTGGTCAAATTGAGGCTGCTGCCATTATGGAACACATTTTGGATGGAAGTGCTTATGTCAAAGCAGATAAAAAGTTGCATGAGATGGATCCTTTGCAGAAACCAAAACAAGATAGATATGCACTTAGAACTTCACCACAATGGCTTGGTCCTTTGATTGAAGTGATTAGATTCTCAACCAAGTCAATTGAGAGAGAGATCAACTCTGTCAACGACAACCCTTTGATCGATGTTTCAAGAAACAAAGCTTTGCATGGTGGAAATTTTCAAGGAACTCCTATTGGAGTATCCATGGATAATACACGTTTGGCTCTCGCATCAATTGGAAAACTTATGTTTGCTCAATTCTCGGAGCTTGTCAATGATTTTTACAACAATGGGTTGCCTTCAAATCTTTCTGCTAGTAGAAATCCTAGCTTGGATTATGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCCTATTGTTCTGAGTTACAATATCTTGCAAATCCAGTTACAACCCATGTCCAGAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCTTCTAGAAAAACCTATGAAGCCATTGAGATCCTTCAACTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAATTGATTTAAGACATTTGGAAGAGAACTTGAAAAACTCAGTCAAGAACACCGTAAGTCAAGTTGCCAAAAAGACCCTTACCATAGGATTCAATGGAGAACTTCATCCTTCAAGATTCTGTGAAAAAGACTTGTTGAAAGTAGTTGATAGGGAACATGTATTTGCTTATATTGATGATCCTTGTAGCGCTACATACCCATTGAGTCAAAAGCTCAGACAAGTGTTGGTAGATCACGCACTAGTTAATGGAGAGAGTGAGAAGAATTTGAACACTTCAATCTTTCAAAAGATTGCAACTTTTGAGGAAGAGTTGAAGACCCTCTTGCCAAAAGAGGTTGAAAGTGCAAGGACCGCATATGAGAGTGGAAACTCAACTATCCCAAACAAGATCATTGGATGCAGATCTTATCCACTTTACAAATTTATTAGAGAGGAGTTGGGAACCGGTTTACTAACTGGAGAAAATGTCATTTCACCAGGTGAGGTGTGTGACAAACTATTCACAGCTATGTGCCAGGGAAAAATTATTGATCCTCTTCTTGAATGTTTGGGAGACTGGAACGGTGCTCCTCTTCCTATTTGTTAA 1860 0.4065 MESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTTTRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEILNAKEAFQSAGINADFFELQPKEGIALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKADKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTIGFNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEEELKTLLPKEVESARTAYESGNSTIPNKIIGCRSYPLYKFIREELGTGLLTGENVISPGEVCDKLFTAMCQGKIIDPLLECLGDWNGAPLPIC 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03339 619 FunFam Phenylalanine ammonia-lyase 1 165 - -
Mepo3g03339 619 FunFam Phenylalanine ammonia-lyase 432 553 - -
Mepo3g03339 619 Gene3D - 432 553 IPR023144 -
Mepo3g03339 619 CDD PAL-HAL 1 429 IPR001106 -
Mepo3g03339 619 Pfam Aromatic amino acid lyase 2 441 IPR001106 -
Mepo3g03339 619 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 101 117 IPR022313 GO:0016841
Mepo3g03339 619 NCBIfam phenylalanine ammonia-lyase 1 608 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mepo3g03339 619 PANTHER HISTIDINE AMMONIA-LYASE 1 619 IPR001106 -
Mepo3g03339 619 Gene3D Fumarase/aspartase (Central domain) 166 614 - -
Mepo3g03339 619 SUPERFAMILY L-aspartase-like 2 619 IPR008948 GO:0003824
Mepo3g03339 619 FunFam Phenylalanine ammonia-lyase 166 468 - -
Mepo3g03339 619 MobiDBLite consensus disorder prediction 1 25 - -
Mepo3g03339 619 Gene3D - 1 165 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03339 Mepo-Chr3 43443501 43446158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03339 1 619 Monolignol Biosynthesis Gene Families AT2G37040 83.845 0.0 1112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03339 K10775 - gmx:100811101 1137.48